KEGG   PATHWAY: plet04814
Entry
plet04814                   Pathway                                
Name
Motor proteins - Phaethon lepturus (White-tailed tropicbird)
Class
Cellular Processes; Cell motility
Pathway map
plet04814  Motor proteins
plet04814

Organism
Phaethon lepturus (White-tailed tropicbird) [GN:plet]
Gene
104613598  KIF18B; kinesin-like protein KIF18B [KO:K26156]
104614012  KIF4A; chromosome-associated kinesin KIF4A [KO:K10395]
104614114  KIF20A; kinesin-like protein KIF20A [KO:K10402]
104614134  DNALI1; axonemal dynein light intermediate polypeptide 1 [KO:K10410]
104614170  [KO:K10425]
104614241  [KO:K10425]
104614261  [KO:K10418]
104614346  DCTN4; dynactin subunit 4 isoform X1 [KO:K10426]
104614685  CAPZA1; F-actin-capping protein subunit alpha-1 [KO:K10364]
104614686  [KO:K12313]
104614714  [KO:K10418]
104614748  ACTR1A; alpha-centractin [KO:K16575]
104614904  [KO:K10375]
104614954  [KO:K10354]
104614964  DYNC1LI1; cytoplasmic dynein 1 light intermediate chain 1 [KO:K10416]
104615178  [KO:K07374]
104615515  [KO:K12314]
104615529  DCTN5; dynactin subunit 5 [KO:K10427]
104615614  [KO:K12750]
104615695  [KO:K10373]
104615769  DYNLRB1; dynein light chain roadblock-type 1 [KO:K10419]
104615782  [KO:K09290]
104615969  [KO:K25419]
104616059  [KO:K12757]
104616240  DYNC2H1; cytoplasmic dynein 2 heavy chain 1 [KO:K10414]
104616310  [KO:K24220]
104616364  MYO9B; LOW QUALITY PROTEIN: unconventional myosin-IXb [KO:K10360]
104616438  [KO:K10393]
104616446  [KO:K09290]
104616492  KIF7; kinesin-like protein KIF7 [KO:K18806]
104616571  DNAI2; dynein intermediate chain 2, axonemal [KO:K11143]
104616722  ACTR10; actin-related protein 10 [KO:K16576]
104616844  TNNC1; troponin C, slow skeletal and cardiac muscles isoform X1 [KO:K05865]
104616853  [KO:K12314]
104616875  [KO:K10415]
104617094  [KO:K10359]
104617104  MYO1B; unconventional myosin-Ib [KO:K10356]
104617229  [KO:K10356]
104617296  MYL9; myosin regulatory light polypeptide 9 isoform X1 [KO:K12755]
104617341  [KO:K10407]
104617447  MYL1; myosin light chain 1/3, skeletal muscle isoform isoform X1 [KO:K05738]
104617592  KIF25; kinesin-like protein KIF25 [KO:K18627]
104617597  [KO:K07374]
104617679  [KO:K12754]
104617692  KIF9; kinesin-like protein KIF9 [KO:K10397]
104617803  KIF16B; kinesin-like protein KIF16B [KO:K17916]
104617966  MYO1E; unconventional myosin-Ie [KO:K10356]
104618253  DNAL4; dynein light chain 4, axonemal [KO:K10412]
104618289  [KO:K24220]
104618392  [KO:K07375]
104618883  MYO1D; unconventional myosin-Id [KO:K10356]
104619230  [KO:K17914]
104619334  DNAH1; dynein heavy chain 1, axonemal [KO:K10408]
104619496  MYH11; LOW QUALITY PROTEIN: myosin-11 [KO:K10352]
104619596  ACTG1; actin, cytoplasmic 2 isoform X1 [KO:K05692]
104619750  DNAH3; dynein heavy chain 3, axonemal [KO:K10408]
104619805  KIF13A; kinesin-like protein KIF13A [KO:K17914]
104619994  [KO:K10396]
104620000  DYNC2LI1; cytoplasmic dynein 2 light intermediate chain 1 [KO:K10417]
104620036  [KO:K10407]
104620164  [KO:K24220]
104620210  [KO:K10364]
104620380  MYO3B; myosin-IIIb [KO:K08834] [EC:2.7.11.1]
104620600  TUBE1; tubulin epsilon chain [KO:K10391]
104620619  KIF23; kinesin-like protein KIF23 [KO:K17387]
104620734  MYO19; unconventional myosin-XIX [KO:K25838]
104620757  KIF21A; kinesin-like protein KIF21A [KO:K24185]
104620987  KIF3A; kinesin-like protein KIF3A [KO:K10394]
104620990  KIF26A; kinesin-like protein KIF26A [KO:K10404]
104621020  KIF11; kinesin-like protein KIF11 [KO:K10398]
104621320  TNNI2; troponin I, fast skeletal muscle [KO:K12043]
104621414  CAPZA2; F-actin-capping protein subunit alpha-2 [KO:K10364]
104621505  DNAH5; dynein heavy chain 5, axonemal [KO:K10408]
104621560  [KO:K10357]
104621654  DNAH8; LOW QUALITY PROTEIN: dynein heavy chain 8, axonemal [KO:K10408]
104621662  KIF26B; kinesin-like protein KIF26B [KO:K10404]
104621802  TUBD1; LOW QUALITY PROTEIN: tubulin delta chain [KO:K10390]
104622015  KIF21B; kinesin-like protein KIF21B [KO:K24185]
104622198  MYO7B; unconventional myosin-VIIb [KO:K21868]
104622207  CENPE; centromere-associated protein E [KO:K11498]
104622211  [KO:K10402]
104622355  KIF24; kinesin-like protein KIF24 [KO:K10393]
104622652  [KO:K12757]
104622659  KIF6; kinesin-like protein KIF6 [KO:K10397]
104622712  KIF18A; LOW QUALITY PROTEIN: kinesin-like protein KIF18A [KO:K10401]
104622763  MYH9; myosin-9 [KO:K10352]
104622772  TNNI1; LOW QUALITY PROTEIN: troponin I, slow skeletal muscle [KO:K10371]
104622807  MYO1C; unconventional myosin-Ic [KO:K10356]
104622836  KIF2C; kinesin-like protein KIF2C isoform X1 [KO:K10393]
104622860  [KO:K07375]
104622883  KIF20B; LOW QUALITY PROTEIN: kinesin-like protein KIF20B [KO:K10402]
104622932  [KO:K24220]
104622981  DYNLRB2; dynein light chain roadblock-type 2 [KO:K10419]
104623092  DYNC1LI2; cytoplasmic dynein 1 light intermediate chain 2 [KO:K10416]
104623153  DYNLL2; dynein light chain 2, cytoplasmic [KO:K10418]
104623183  [KO:K20197]
104623215  MYO6; unconventional myosin-VI [KO:K10358]
104623630  KIF15; LOW QUALITY PROTEIN: kinesin-like protein KIF15 [KO:K10400]
104623635  [KO:K10415]
104623766  [KO:K24723]
104623767  TCTEX1D1; tctex1 domain-containing protein 1 [KO:K25421]
104623825  MYL3; myosin light chain 3 [KO:K12749]
104623952  MYO5C; unconventional myosin-Vc [KO:K10357]
104624106  [KO:K12559]
104624236  KIF19; LOW QUALITY PROTEIN: kinesin-like protein KIF19 [KO:K26157]
104624247  CCDC64; bicaudal D-related protein 1 [KO:K16756]
104624281  MYH10; myosin-10 isoform X1 [KO:K10352]
104624382  [KO:K10408]
104624704  STARD9; stAR-related lipid transfer protein 9 [KO:K16491]
104624781  DNAH12; dynein heavy chain 12, axonemal [KO:K10408]
104624794  [KO:K07375]
104624968  KIF14; kinesin-like protein KIF14 [KO:K17915]
104624976  [KO:K05692]
104625207  MYO9A; unconventional myosin-IXa [KO:K10360]
104625382  DNAH10; dynein heavy chain 10, axonemal [KO:K10408]
104625407  [KO:K12756]
104625450  KIF5B; kinesin-1 heavy chain [KO:K10396]
104625489  DNAL1; dynein light chain 1, axonemal [KO:K10411]
104625544  TUBB4B; tubulin beta-4B chain isoform X1 [KO:K07375]
104625820  DCTN6; dynactin subunit 6 [KO:K10428]
104625963  DYNLT3; dynein light chain Tctex-type 3 [KO:K10420]
104625965  [KO:K12559]
104626221  [KO:K10351]
104626365  DYNC1H1; LOW QUALITY PROTEIN: cytoplasmic dynein 1 heavy chain 1 [KO:K10413]
104626376  HOOK3; protein Hook homolog 3 [KO:K16536]
104626411  MYO3A; myosin-IIIa [KO:K08834] [EC:2.7.11.1]
104626423  DNAH11; LOW QUALITY PROTEIN: dynein heavy chain 11, axonemal [KO:K10408]
104626607  DYNLT1; dynein light chain Tctex-type 1 [KO:K10420]
104626961  TNNT2; LOW QUALITY PROTEIN: troponin T, cardiac muscle [KO:K12045]
104627191  [KO:K10389]
104627298  KIF3B; kinesin-like protein KIF3B [KO:K20196]
104627361  KIF27; kinesin-like protein KIF27 [KO:K24186]
104627547  KIFAP3; kinesin-associated protein 3 [KO:K25388]
104627559  MYO1H; unconventional myosin-Ih [KO:K10356]
104627711  WDR63; WD repeat-containing protein 63 [KO:K24722]
104627797  MYO15A; unconventional myosin-XV [KO:K10361]
104628247  KIF1B; kinesin-like protein KIF1B isoform X1 [KO:K10392]
104628275  KIF17; kinesin-like protein KIF17 [KO:K20198]
104628314  TNNT3; troponin T, fast skeletal muscle [KO:K12046]
104628582  [KO:K07374]
104628652  [KO:K05692]
104628742  CAPZB; F-actin-capping protein subunit beta [KO:K10365]
104628862  DNAH7; LOW QUALITY PROTEIN: dynein heavy chain 7, axonemal [KO:K10408]
Reference
  Authors
Hirokawa N, Niwa S, Tanaka Y
  Title
Molecular motors in neurons: transport mechanisms and roles in brain function, development, and disease.
  Journal
Neuron 68:610-38 (2010)
DOI:10.1016/j.neuron.2010.09.039
Reference
PMID:25470043 (PDB:4RH7)
  Authors
Schmidt H, Zalyte R, Urnavicius L, Carter AP
  Title
Structure of human cytoplasmic dynein-2 primed for its power stroke.
  Journal
Nature 518:435-438 (2015)
DOI:10.1038/nature14023
Reference
PMID:22398446 (PDB:3VKG 3VKH)
  Authors
Kon T, Oyama T, Shimo-Kon R, Imamula K, Shima T, Sutoh K, Kurisu G
  Title
The 2.8 A crystal structure of the dynein motor domain.
  Journal
Nature 484:345-50 (2012)
DOI:10.1038/nature10955
Reference
PMID:22997337 (PDB:3J1T 3J1U)
  Authors
Redwine WB, Hernandez-Lopez R, Zou S, Huang J, Reck-Peterson SL, Leschziner AE
  Title
Structural basis for microtubule binding and release by dynein.
  Journal
Science 337:1532-1536 (2012)
DOI:10.1126/science.1224151
Reference
  Authors
Gibbs KL, Greensmith L, Schiavo G
  Title
Regulation of Axonal Transport by Protein Kinases.
  Journal
Trends Biochem Sci 40:597-610 (2015)
DOI:10.1016/j.tibs.2015.08.003
Reference
PMID:28602352 (PDB:5NUG 5NVS 5NVU 5NW4)
  Authors
Zhang K, Foster HE, Rondelet A, Lacey SE, Bahi-Buisson N, Bird AW, Carter AP
  Title
Cryo-EM Reveals How Human Cytoplasmic Dynein Is Auto-inhibited and Activated.
  Journal
Cell 169:1303-1314.e18 (2017)
DOI:10.1016/j.cell.2017.05.025
Reference
PMID:25814576 (PDB:5ADX 5AFR 5AFU)
  Authors
Urnavicius L, Zhang K, Diamant AG, Motz C, Schlager MA, Yu M, Patel NA, Robinson CV, Carter AP
  Title
The structure of the dynactin complex and its interaction with dynein.
  Journal
Science 347:1441-1446 (2015)
DOI:10.1126/science.aaa4080
Reference
PMID:29420470 (PDB:5OWO 6F1T 6F1U 6F1V 6F1Y 6F1Z 6F38 6F3A)
  Authors
Urnavicius L, Lau CK, Elshenawy MM, Morales-Rios E, Motz C, Yildiz A, Carter AP
  Title
Cryo-EM shows how dynactin recruits two dyneins for faster movement.
  Journal
Nature 554:202-206 (2018)
DOI:10.1038/nature25462
Reference
  Authors
Reck-Peterson SL, Redwine WB, Vale RD, Carter AP
  Title
The cytoplasmic dynein transport machinery and its many cargoes.
  Journal
Nat Rev Mol Cell Biol 19:382-398 (2018)
DOI:10.1038/s41580-018-0004-3
Reference
PMID:23434508 (PDB:3J2U)
  Authors
Asenjo AB, Chatterjee C, Tan D, DePaoli V, Rice WJ, Diaz-Avalos R, Silvestry M, Sosa H
  Title
Structural model for tubulin recognition and deformation by kinesin-13 microtubule depolymerases.
  Journal
Cell Rep 3:759-68 (2013)
DOI:10.1016/j.celrep.2013.01.030
Reference
PMID:10338210 (PDB:1B7T)
  Authors
Houdusse A, Kalabokis VN, Himmel D, Szent-Gyorgyi AG, Cohen C
  Title
Atomic structure of scallop myosin subfragment S1 complexed with MgADP: a novel conformation of the myosin head.
  Journal
Cell 97:459-70 (1999)
DOI:10.1016/s0092-8674(00)80756-4
Reference
PMID:9428521 (PDB:3KIN)
  Authors
Kozielski F, Sack S, Marx A, Thormahlen M, Schonbrunn E, Biou V, Thompson A, Mandelkow EM, Mandelkow E
  Title
The crystal structure of dimeric kinesin and implications for microtubule-dependent motility.
  Journal
Cell 91:985-94 (1997)
DOI:10.1016/s0092-8674(00)80489-4
Reference
PMID:8316857 (PDB:2MYS)
  Authors
Rayment I, Rypniewski WR, Schmidt-Base K, Smith R, Tomchick DR, Benning MM, Winkelmann DA, Wesenberg G, Holden HM
  Title
Three-dimensional structure of myosin subfragment-1: a molecular motor.
  Journal
Science 261:50-8 (1993)
DOI:10.1126/science.8316857
Reference
  Authors
Parker D, Bryant Z, Delp SL
  Title
Coarse-Grained Structural Modeling of Molecular Motors Using Multibody Dynamics.
  Journal
Cell Mol Bioeng 2:366-374 (2009)
DOI:10.1007/s12195-009-0084-4
Reference
  Authors
Dominguez R, Holmes KC
  Title
Actin structure and function.
  Journal
Annu Rev Biophys 40:169-86 (2011)
DOI:10.1146/annurev-biophys-042910-155359
Reference
PMID:31919429 (PDB:6KN7 6KN8)
  Authors
Yamada Y, Namba K, Fujii T
  Title
Cardiac muscle thin filament structures reveal calcium regulatory mechanism.
  Journal
Nat Commun 11:153 (2020)
DOI:10.1038/s41467-019-14008-1
Reference
  Authors
Kruppa AJ, Buss F
  Title
Motor proteins at the mitochondria-cytoskeleton interface.
  Journal
J Cell Sci 134:239092 (2021)
DOI:10.1242/jcs.226084
KO pathway
ko04814   

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