KEGG   PATHWAY: pre00630
Entry
pre00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Metapseudomonas resinovorans
Class
Metabolism; Carbohydrate metabolism
Pathway map
pre00630  Glyoxylate and dicarboxylate metabolism
pre00630

Module
pre_M00012  Glyoxylate cycle [PATH:pre00630]
pre_M00621  Glycine cleavage system [PATH:pre00630]
Other DBs
GO: 0046487 0043648
Organism
Metapseudomonas resinovorans [GN:pre]
Gene
PCA10_00420  [KO:K01091] [EC:3.1.3.18]
PCA10_02280  spuI; gamma-glutamylpolyamine synthetase SpuI [KO:K01915] [EC:6.3.1.2]
PCA10_02300  spuB; gamma-glutamylpolyamine synthetase SpuB [KO:K01915] [EC:6.3.1.2]
PCA10_04120  fdsG; formate dehydrogenase gamma subunit [KO:K00127]
PCA10_04130  fdsB; formate dehydrogenase beta subunit [KO:K00124]
PCA10_04140  fdsA; formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
PCA10_04150  fdsD; formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
PCA10_04430  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
PCA10_04480  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
PCA10_04650  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
PCA10_05020  puuA; gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
PCA10_05540  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
PCA10_09050  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
PCA10_12130  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
PCA10_14260  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
PCA10_14280  [KO:K01915] [EC:6.3.1.2]
PCA10_14380  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
PCA10_14410  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
PCA10_14420  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
PCA10_14640  eda; 2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
PCA10_15510  puuA; gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
PCA10_16020  [KO:K00865] [EC:2.7.1.165]
PCA10_17110  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
PCA10_19090  [KO:K11529] [EC:2.7.1.165]
PCA10_19100  glxR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
PCA10_19110  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
PCA10_19120  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
PCA10_19980  eda; 2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
PCA10_21630  [KO:K01647] [EC:2.3.3.1]
PCA10_21700  lpd; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PCA10_22590  fadA; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
PCA10_22990  [KO:K01895] [EC:6.2.1.1]
PCA10_23230  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
PCA10_24580  [KO:K03781] [EC:1.11.1.6]
PCA10_24670  lpd; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PCA10_25000  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
PCA10_27520  acnB; aconitase B [KO:K01682] [EC:4.2.1.3 4.2.1.99]
PCA10_27910  [KO:K00626] [EC:2.3.1.9]
PCA10_27940  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
PCA10_27960  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
PCA10_27970  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
PCA10_27980  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
PCA10_28110  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
PCA10_28530  [KO:K00626] [EC:2.3.1.9]
PCA10_30210  [KO:K03781] [EC:1.11.1.6]
PCA10_31600  gcvH; glycine cleavage system H protein [KO:K02437]
PCA10_31610  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
PCA10_31630  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
PCA10_32420  [KO:K00626] [EC:2.3.1.9]
PCA10_32440  [KO:K01895] [EC:6.2.1.1]
PCA10_32550  [KO:K01915] [EC:6.3.1.2]
PCA10_34770  [KO:K00626] [EC:2.3.1.9]
PCA10_36960  acnB; aconitase B [KO:K01682] [EC:4.2.1.3 4.2.1.99]
PCA10_37220  prpC; methylcitrate synthase [KO:K01659] [EC:2.3.3.5]
PCA10_37450  [KO:K05825] [EC:2.6.1.-]
PCA10_37990  [KO:K01091] [EC:3.1.3.18]
PCA10_38140  acnA; aconitase A [KO:K27802]
PCA10_38300  kynB; kynurenine formamidase [KO:K07130] [EC:3.5.1.9]
PCA10_39020  puuA; gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
PCA10_40560  [KO:K01915] [EC:6.3.1.2]
PCA10_41660  phaJ; (R)-specific enoyl-CoA hydratase [KO:K17865] [EC:4.2.1.55]
PCA10_42490  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PCA10_43440  gcvH; glycine cleavage system H protein [KO:K02437]
PCA10_43450  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
PCA10_43460  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
PCA10_43480  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
PCA10_47890  [KO:K00626] [EC:2.3.1.9]
PCA10_47910  hprA; glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
PCA10_48950  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PCA10_48970  [KO:K00626] [EC:2.3.1.9]
PCA10_49590  [KO:K01915] [EC:6.3.1.2]
PCA10_50540  [KO:K00626] [EC:2.3.1.9]
PCA10_50700  [KO:K00127]
PCA10_50710  [KO:K00124]
PCA10_50720  [KO:K00123] [EC:1.17.1.9]
PCA10_53010  hutG; formiminoglutamase [KO:K01458] [EC:3.5.1.68]
PCA10_53350  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
PCA10_54350  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
PCA10_54360  gcvH; glycine cleavage system H protein [KO:K02437]
PCA10_54370  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
PCA10_56130  puuA; gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pre00010  Glycolysis / Gluconeogenesis
pre00020  Citrate cycle (TCA cycle)
pre00030  Pentose phosphate pathway
pre00053  Ascorbate and aldarate metabolism
pre00071  Fatty acid degradation
pre00230  Purine metabolism
pre00250  Alanine, aspartate and glutamate metabolism
pre00260  Glycine, serine and threonine metabolism
pre00270  Cysteine and methionine metabolism
pre00620  Pyruvate metabolism
pre00710  Carbon fixation by Calvin cycle
pre00750  Vitamin B6 metabolism
pre00910  Nitrogen metabolism
KO pathway
ko00630   

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