KEGG   PATHWAY: psw00630
Entry
psw00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas cremoricolorata
Class
Metabolism; Carbohydrate metabolism
Pathway map
psw00630  Glyoxylate and dicarboxylate metabolism
psw00630

Module
psw_M00621  Glycine cleavage system [PATH:psw00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas cremoricolorata [GN:psw]
Gene
LK03_19710  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
LK03_13780  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
LK03_02545  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
LK03_12200  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
LK03_03965  malate synthase [KO:K01638] [EC:2.3.3.9]
LK03_14045  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
LK03_13675  methylcitrate synthase [KO:K01659] [EC:2.3.3.5]
LK03_20325  aconitate hydratase [KO:K27802] [EC:4.2.1.3 4.2.1.99]
LK03_19895  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
LK03_14335  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
LK03_09680  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
LK03_08665  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
LK03_00340  3-hydroxybutyryl-CoA dehydratase [KO:K17865] [EC:4.2.1.55]
LK03_07895  catalase [KO:K03781] [EC:1.11.1.6]
LK03_06545  katE; hydroperoxidase [KO:K03781] [EC:1.11.1.6]
LK03_17400  catalase [KO:K03781] [EC:1.11.1.6]
LK03_09810  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
LK03_09460  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
LK03_20950  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
LK03_06475  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
LK03_07540  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
LK03_07005  gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
LK03_07010  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
LK03_03845  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
LK03_08995  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LK03_04100  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LK03_10285  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
LK03_10280  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
LK03_05175  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
LK03_14080  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
LK03_12385  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
LK03_10290  glycine cleavage system protein H [KO:K02437]
LK03_05170  glycine cleavage system protein H [KO:K02437]
LK03_12985  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
LK03_12980  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
LK03_12975  tartronate semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
LK03_12970  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
LK03_10405  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LK03_14005  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
LK03_14000  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
LK03_13995  formate dehydrogenase [KO:K00124]
LK03_16510  formate dehydrogenase [KO:K00124]
LK03_16515  formate dehydrogenase [KO:K00127]
LK03_01335  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
LK03_04075  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
psw00010  Glycolysis / Gluconeogenesis
psw00020  Citrate cycle (TCA cycle)
psw00030  Pentose phosphate pathway
psw00053  Ascorbate and aldarate metabolism
psw00071  Fatty acid degradation
psw00230  Purine metabolism
psw00250  Alanine, aspartate and glutamate metabolism
psw00260  Glycine, serine and threonine metabolism
psw00620  Pyruvate metabolism
psw00710  Carbon fixation by Calvin cycle
psw00750  Vitamin B6 metabolism
psw00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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