KEGG   PATHWAY: pvb00230
Entry
pvb00230                    Pathway                                
Name
Purine metabolism - Pseudoalteromonas viridis
Class
Metabolism; Nucleotide metabolism
Pathway map
pvb00230  Purine metabolism
pvb00230

Module
pvb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pvb00230]
pvb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pvb00230]
pvb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pvb00230]
pvb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pvb00230]
pvb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pvb00230]
Other DBs
GO: 0006163 0042278
Organism
Pseudoalteromonas viridis [GN:pvb]
Gene
J5X90_08965  NUDIX domain-containing protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
J5X90_04590  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
J5X90_22470  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
J5X90_14620  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
J5X90_09745  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
J5X90_00180  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
J5X90_08410  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
J5X90_13215  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
J5X90_04395  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
J5X90_09060  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
J5X90_13220  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
J5X90_14920  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
J5X90_14915  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
J5X90_07945  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
J5X90_13615  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
J5X90_08420  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
J5X90_16675  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
J5X90_20420  bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
J5X90_02475  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
J5X90_04595  yrfG; GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
J5X90_09040  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
J5X90_09540  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
J5X90_22465  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
J5X90_17890  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
J5X90_02630  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
J5X90_02230  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
J5X90_03665  yjjX; inosine/xanthosine triphosphatase [KO:K01529] [EC:3.6.1.73]
J5X90_08875  XTP/dITP diphosphatase [KO:K01519] [EC:3.6.1.66]
J5X90_02625  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
J5X90_02900  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
J5X90_15285  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
J5X90_15290  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
J5X90_16240  deoxyguanosinetriphosphate triphosphohydrolase family protein [KO:K01129] [EC:3.1.5.1]
J5X90_02910  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
J5X90_06175  gppA; guanosine-5'-triphosphate,3'-diphosphate diphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
J5X90_08245  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
J5X90_05010  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
J5X90_21350  hypothetical protein [KO:K01768] [EC:4.6.1.1]
J5X90_02100  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
J5X90_06105  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
J5X90_20130  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
J5X90_16625  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
J5X90_13785  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
J5X90_10265  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
J5X90_08975  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
J5X90_18420  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
J5X90_06965  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
J5X90_06975  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
J5X90_06980  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
J5X90_09000  FAD-dependent monooxygenase [KO:K16839] [EC:1.14.13.113]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pvb00030  Pentose phosphate pathway
pvb00220  Arginine biosynthesis
pvb00250  Alanine, aspartate and glutamate metabolism
pvb00260  Glycine, serine and threonine metabolism
pvb00340  Histidine metabolism
pvb00630  Glyoxylate and dicarboxylate metabolism
pvb00730  Thiamine metabolism
pvb00740  Riboflavin metabolism
pvb00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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