KEGG   PATHWAY: pvk00230
Entry
pvk00230                    Pathway                                
Name
Purine metabolism - Pseudomonas viciae
Class
Metabolism; Nucleotide metabolism
Pathway map
pvk00230  Purine metabolism
pvk00230

Module
pvk_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pvk00230]
pvk_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pvk00230]
pvk_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pvk00230]
pvk_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pvk00230]
pvk_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pvk00230]
pvk_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pvk00230]
pvk_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pvk00230]
Other DBs
GO: 0006163 0042278
Organism
Pseudomonas viciae [GN:pvk]
Gene
EPZ47_02550  NUDIX domain-containing protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
EPZ47_01380  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
EPZ47_15220  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
EPZ47_28980  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
EPZ47_14895  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
EPZ47_24875  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
EPZ47_19425  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
EPZ47_03165  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
EPZ47_22535  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
EPZ47_24040  formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
EPZ47_24100  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
EPZ47_22530  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
EPZ47_29485  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
EPZ47_29490  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
EPZ47_07350  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
EPZ47_18190  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
EPZ47_03170  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
EPZ47_09320  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
EPZ47_08725  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
EPZ47_05900  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
EPZ47_01375  GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
EPZ47_08985  pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
EPZ47_25390  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
EPZ47_24770  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
EPZ47_05330  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
EPZ47_05240  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
EPZ47_28070  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
EPZ47_28865  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
EPZ47_09245  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
EPZ47_09240  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
EPZ47_25720  xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K11177] [EC:1.17.1.4]
EPZ47_25725  xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
EPZ47_25730  (2Fe-2S)-binding protein [KO:K13483]
EPZ47_05335  glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
EPZ47_09230  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
EPZ47_29015  guanylate kinase [KO:K00942] [EC:2.7.4.8]
EPZ47_22685  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
EPZ47_22910  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
EPZ47_13120  ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
EPZ47_08885  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
EPZ47_21420  phosphohydrolase [KO:K06952] [EC:3.1.3.89]
EPZ47_29025  bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
EPZ47_18690  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
EPZ47_28605  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
EPZ47_22560  GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
EPZ47_28745  class I adenylate cyclase [KO:K05851] [EC:4.6.1.1]
EPZ47_02730  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
EPZ47_25955  amn; AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
EPZ47_11695  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
EPZ47_03360  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
EPZ47_05620  adenylate kinase [KO:K00939] [EC:2.7.4.3]
EPZ47_22555  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
EPZ47_15045  phosphodiesterase [KO:K03651] [EC:3.1.4.53]
EPZ47_02560  3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
EPZ47_27110  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
EPZ47_04605  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
EPZ47_02490  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
EPZ47_04600  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
EPZ47_21480  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
EPZ47_21495  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
EPZ47_20105  Asp/Glu/hydantoin racemase [KO:K16841] [EC:5.1.99.3]
EPZ47_21490  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
EPZ47_21500  alc; allantoicase [KO:K01477] [EC:3.5.3.4]
EPZ47_21505  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
EPZ47_17545  FAA hydrolase family protein [KO:K16856] [EC:4.3.2.3]
EPZ47_02995  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
EPZ47_03000  urease subunit beta [KO:K01429] [EC:3.5.1.5]
EPZ47_03015  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
EPZ47_06535  arcC; carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pvk00030  Pentose phosphate pathway
pvk00220  Arginine biosynthesis
pvk00250  Alanine, aspartate and glutamate metabolism
pvk00260  Glycine, serine and threonine metabolism
pvk00340  Histidine metabolism
pvk00630  Glyoxylate and dicarboxylate metabolism
pvk00730  Thiamine metabolism
pvk00740  Riboflavin metabolism
pvk00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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