KEGG   PATHWAY: rap00240
Entry
rap00240                    Pathway                                
Name
Pyrimidine metabolism - Rhodovastum atsumiense
Class
Metabolism; Nucleotide metabolism
Pathway map
rap00240  Pyrimidine metabolism
rap00240

Module
rap_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rap00240]
rap_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rap00240]
rap_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rap00240]
Other DBs
GO: 0006220 0006213
Organism
Rhodovastum atsumiense [GN:rap]
Gene
RHOA_0117  nrdZ; Vitamin B12-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
RHOA_0428  pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22]
RHOA_0456  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
RHOA_0759  ydfG; 3-hydroxy acid dehydrogenase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
RHOA_0766  [KO:K01489] [EC:3.5.4.5]
RHOA_0862  thyX; Flavin-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
RHOA_1090  dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13]
RHOA_1095  [KO:K06287] [EC:3.6.1.-]
RHOA_1144  [KO:K06016] [EC:3.5.1.6 3.5.1.87]
RHOA_1194  pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
RHOA_1211  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
RHOA_1212  pyrC; Dihydroorotase [KO:K01465] [EC:3.5.2.3]
RHOA_1303  [KO:K21636] [EC:1.1.98.6]
RHOA_1484  [KO:K06952] [EC:3.1.3.89]
RHOA_1590  dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
RHOA_1610  rutF; flavin reductase [KO:K09024] [EC:1.5.1.-]
RHOA_1667  pyrD; Dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
RHOA_1858  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
RHOA_1863  pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
RHOA_2132  [KO:K01081] [EC:3.1.3.5]
RHOA_2185  codA; Cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
RHOA_2229  [KO:K06287] [EC:3.6.1.-]
RHOA_2253  rutE; putative malonic semialdehyde reductase [KO:K09019] [EC:1.1.1.-]
RHOA_2664  surE; 5'-nucleotidase SurE 1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
RHOA_2923  [KO:K01465] [EC:3.5.2.3]
RHOA_2970  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
RHOA_3512  [KO:K00525] [EC:1.17.4.1]
RHOA_3513  nrdB; Ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
RHOA_3661  [KO:K01465] [EC:3.5.2.3]
RHOA_4279  hyuC; N-carbamoyl-L-amino-acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
RHOA_4424  [KO:K06016] [EC:3.5.1.6 3.5.1.87]
RHOA_5129  hyuA; D-hydantoinase [KO:K01464] [EC:3.5.2.2]
RHOA_5560  tmk; hypothetical protein [KO:K00943] [EC:2.7.4.9]
RHOA_5761  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
RHOA_5846  ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K09769] [EC:3.1.4.16]
RHOA_5882  [KO:K01464] [EC:3.5.2.2]
RHOA_5916  pyrE; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
RHOA_6110  carA; carbamoyl phosphate synthetase subunit alpha [KO:K01956] [EC:6.3.5.5]
RHOA_6112  carB; carbamoyl phosphate synthetase subunit beta [KO:K01955] [EC:6.3.5.5]
RHOA_6120  hyuC; N-carbamoyl-L-amino-acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
RHOA_PE0092  dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
RHOA_PF0001  [KO:K00761] [EC:2.4.2.9]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
rap00030  Pentose phosphate pathway
rap00220  Arginine biosynthesis
rap00250  Alanine, aspartate and glutamate metabolism
rap00280  Valine, leucine and isoleucine degradation
rap00410  beta-Alanine metabolism
KO pathway
ko00240   

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