KEGG   PATHWAY: rhp00230
Entry
rhp00230                    Pathway                                
Name
Purine metabolism - Rhodobacter xanthinilyticus
Class
Metabolism; Nucleotide metabolism
Pathway map
rhp00230  Purine metabolism
rhp00230

Module
rhp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rhp00230]
rhp_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rhp00230]
rhp_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rhp00230]
rhp_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rhp00230]
rhp_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rhp00230]
rhp_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:rhp00230]
Other DBs
GO: 0006163 0042278
Organism
Rhodobacter xanthinilyticus [GN:rhp]
Gene
LPB142_08495  hypothetical protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
LPB142_03710  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
LPB142_09310  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
LPB142_13310  phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
LPB142_10430  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
LPB142_11255  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
LPB142_05965  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
LPB142_03565  phosphoribosylformylglycinamidine synthase II [KO:K23269] [EC:6.3.5.3]
LPB142_06840  phosphoribosylformylglycinamidine synthase [KO:K23264] [EC:6.3.5.3]
LPB142_06845  phosphoribosylformylglycinamidine synthase I [KO:K23265] [EC:6.3.5.3 3.5.1.2]
LPB142_05960  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
LPB142_13300  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
LPB142_13295  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
LPB142_06835  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
LPB142_10490  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
LPB142_02000  bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
LPB142_04360  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
LPB142_11650  multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
LPB142_06560  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
LPB142_14580  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
LPB142_13215  polyphenol oxidase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
LPB142_09585  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
LPB142_09030  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
LPB142_08150  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
LPB142_01070  non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
LPB142_06650  xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
LPB142_04440  xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
LPB142_04435  xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
LPB142_09420  glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
LPB142_06110  guanine deaminase [KO:K01487] [EC:3.5.4.3]
LPB142_09365  guanylate kinase [KO:K00942] [EC:2.7.4.8]
LPB142_06685  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
LPB142_11980  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
LPB142_11400  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
LPB142_00320  hypothetical protein [KO:K06952] [EC:3.1.3.89]
LPB142_14140  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
LPB142_08840  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
LPB142_06265  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
LPB142_11330  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
LPB142_01875  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
LPB142_01880  adenine deaminase [KO:K01486] [EC:3.5.4.2]
LPB142_14785  hypothetical protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
LPB142_06130  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
LPB142_13755  adenylate kinase [KO:K00939] [EC:2.7.4.3]
LPB142_11700  adenylate kinase [KO:K00939] [EC:2.7.4.3]
LPB142_09645  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
LPB142_13275  adenylyltransferase [KO:K00958] [EC:2.7.7.4]
LPB142_11625  hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
LPB142_11630  OHCU decarboxylase [KO:K16842] [EC:3.5.2.5]
LPB142_11635  (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
LPB142_11640  Ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
LPB142_12915  urease subunit alpha [KO:K01428] [EC:3.5.1.5]
LPB142_12920  urease subunit beta [KO:K01429] [EC:3.5.1.5]
LPB142_12925  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
rhp00030  Pentose phosphate pathway
rhp00220  Arginine biosynthesis
rhp00250  Alanine, aspartate and glutamate metabolism
rhp00260  Glycine, serine and threonine metabolism
rhp00340  Histidine metabolism
rhp00630  Glyoxylate and dicarboxylate metabolism
rhp00730  Thiamine metabolism
rhp00740  Riboflavin metabolism
rhp00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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