KEGG   PATHWAY: salp03440
Entry
salp03440                   Pathway                                
Name
Homologous recombination - Salvelinus sp. IW2-2015 (Arctic char)
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
salp03440  Homologous recombination
salp03440

Other DBs
GO: 0000724
Organism
Salvelinus sp. IW2-2015 (Arctic char) [GN:salp]
Gene
111949483  brip1; Fanconi anemia group J protein [KO:K15362] [EC:5.6.2.3]
111949896  top3b; DNA topoisomerase 3-beta-1 [KO:K03165] [EC:5.6.2.1]
111950256  rad51d; DNA repair protein RAD51 homolog 4 isoform X1 [KO:K10871]
111950548  [KO:K11864] [EC:3.4.19.-]
111950562  rad51c; DNA repair protein RAD51 homolog 3 [KO:K10870]
111950586  [KO:K20775]
111950751  [KO:K03504]
111951323  [KO:K03111]
111951325  [KO:K03111]
111953303  [KO:K10879]
111953403  [KO:K10728]
111953493  rbbp8; DNA endonuclease RBBP8 isoform X1 [KO:K20773] [EC:3.1.-.-]
111954496  rad51b; DNA repair protein RAD51 homolog 2 isoform X1 [KO:K10869]
111954529  xrcc3; DNA repair protein XRCC3 isoform X1 [KO:K10880]
111954551  rad51; DNA repair protein RAD51 homolog 1 [KO:K04482]
111955161  [KO:K10740]
111955298  [KO:K10881]
111955910  [KO:K10739]
111955938  [KO:K10740]
111958053  pold2; DNA polymerase delta subunit 2 [KO:K02328]
111958113  atm; serine-protein kinase ATM isoform X1 [KO:K04728] [EC:2.7.11.1]
111958671  [KO:K07466]
111958742  [KO:K10739]
111959807  bard1; BRCA1-associated RING domain protein 1 [KO:K10683]
111960628  brca2; breast cancer type 2 susceptibility protein isoform X1 [KO:K08775]
111962427  blm; Bloom syndrome protein isoform X1 [KO:K10901] [EC:5.6.2.4]
111962470  [KO:K19528]
111962674  [KO:K19528]
111962832  [KO:K20774]
111964149  [KO:K11864] [EC:3.4.19.-]
111964810  nbn; LOW QUALITY PROTEIN: nibrin [KO:K10867]
111965214  [KO:K10739]
111970363  [KO:K19528]
111973211  [KO:K10728]
111973380  [KO:K04482]
111976145  rad54l; DNA repair and recombination protein RAD54-like [KO:K10875] [EC:5.6.2.-]
111977731  brca1; breast cancer type 1 susceptibility protein isoform X1 [KO:K10605] [EC:2.3.2.27]
111978330  eme1; crossover junction endonuclease EME1 isoform X1 [KO:K10882] [EC:3.1.22.-]
111980702  rad50; DNA repair protein RAD50 [KO:K10866] [EC:3.6.-.-]
111980744  [KO:K20775]
111981299  [KO:K20774]
111982657  [KO:K07466]
112068334  [KO:K12173]
112068413  sem1; 26S proteasome complex subunit SEM1 [KO:K10881]
112068772  babam2; BRISC and BRCA1-A complex member 2 [KO:K12173]
112069650  rad52; DNA repair protein RAD52 homolog isoform X1 [KO:K10873]
112071176  mre11; LOW QUALITY PROTEIN: double-strand break repair protein MRE11 [KO:K10865]
112072341  babam1; LOW QUALITY PROTEIN: BRISC and BRCA1-A complex member 1 [KO:K20776]
112074650  [KO:K02327] [EC:2.7.7.7]
112075427  rad54b; LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B [KO:K10877] [EC:5.6.2.-]
112076423  mus81; LOW QUALITY PROTEIN: crossover junction endonuclease MUS81 [KO:K08991] [EC:3.1.22.-]
112080151  [KO:K10879]
112080848  pold4; DNA polymerase delta subunit 4 [KO:K03505]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   

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