KEGG   PATHWAY: spu00010
Entry
spu00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Strongylocentrotus purpuratus (purple sea urchin)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
spu00010  Glycolysis / Gluconeogenesis
spu00010

Module
spu_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:spu00010]
spu_M00002  Glycolysis, core module involving three-carbon compounds [PATH:spu00010]
spu_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:spu00010]
spu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:spu00010]
Other DBs
GO: 0006096 0006094
Organism
Strongylocentrotus purpuratus (purple sea urchin) [GN:spu]
Gene
594105  hexokinase-2 isoform X1 [KO:K00844] [EC:2.7.1.1]
581884  hexokinase-2 [KO:K00844] [EC:2.7.1.1]
764863  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
762939  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
548617  ATP-dependent 6-phosphofructokinase, muscle type [KO:K00850] [EC:2.7.1.11]
577064  fructose-1,6-bisphosphatase 1 [KO:K03841] [EC:3.1.3.11]
588688  fructose-1,6-bisphosphatase 1 [KO:K03841] [EC:3.1.3.11]
548623  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
548616  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
115922580  triosephosphate isomerase-like [KO:K01803] [EC:5.3.1.1]
578260  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
115918053  LOW QUALITY PROTEIN: glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00134] [EC:1.2.1.12]
100890751  probable phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
591606  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
579256  enolase [KO:K01689] [EC:4.2.1.11]
115918697  enolase-like [KO:K01689] [EC:4.2.1.11]
583138  enolase 4 [KO:K27394] [EC:4.2.1.11]
592628  pyruvate kinase PKM [KO:K00873] [EC:2.7.1.40]
752050  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
100891958  pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
576867  dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
577103  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
586683  L-lactate dehydrogenase isoform X1 [KO:K00016] [EC:1.1.1.27]
115917976  L-lactate dehydrogenase-like isoform X1 [KO:K00016] [EC:1.1.1.27]
579220  alcohol dehydrogenase class-3 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
587281  aldo-keto reductase family 1 member A1-B [KO:K00002] [EC:1.1.1.2]
581754  aldehyde dehydrogenase, mitochondrial [KO:K00128] [EC:1.2.1.3]
581706  aldehyde dehydrogenase, mitochondrial [KO:K00128] [EC:1.2.1.3]
105445554  aldehyde dehydrogenase, dimeric NADP-preferring [KO:K00128] [EC:1.2.1.3]
593236  aldehyde dehydrogenase family 16 member A1 [KO:K00128] [EC:1.2.1.3]
105445170  aldehyde dehydrogenase family 3 member A2 isoform X1 [KO:K00128] [EC:1.2.1.3]
756945  aldehyde dehydrogenase, dimeric NADP-preferring [KO:K00128] [EC:1.2.1.3]
588376  alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
580956  4-trimethylaminobutyraldehyde dehydrogenase [KO:K00149] [EC:1.2.1.47 1.2.1.3]
583864  4-trimethylaminobutyraldehyde dehydrogenase A [KO:K00149] [EC:1.2.1.47 1.2.1.3]
115918585  4-trimethylaminobutyraldehyde dehydrogenase-like [KO:K00149] [EC:1.2.1.47 1.2.1.3]
585742  acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
592086  acetyl-coenzyme A synthetase, cytoplasmic [KO:K01895] [EC:6.2.1.1]
115918532  acetyl-coenzyme A synthetase, cytoplasmic-like [KO:K01895] [EC:6.2.1.1]
589863  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
585847  aldose 1-epimerase-like [KO:K01785] [EC:5.1.3.3]
755969  aldose 1-epimerase-like [KO:K01785] [EC:5.1.3.3]
575075  phosphoglucomutase-1 isoform X1 [KO:K01835] [EC:5.4.2.2]
763027  phosphoglucomutase-2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
578064  glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
587212  glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
588810  ADP-dependent glucokinase [KO:K08074] [EC:2.7.1.147]
594179  ADP-dependent glucokinase [KO:K08074] [EC:2.7.1.147]
100892136  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
100894136  uncharacterized protein LOC100894136 [KO:K01792] [EC:5.1.3.15]
100891283  multiple inositol polyphosphate phosphatase 1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
115921721  multiple inositol polyphosphate phosphatase 1-like [KO:K03103] [EC:3.1.3.62 3.1.3.80]
752532  phosphoenolpyruvate carboxykinase, cytosolic [GTP] isoform X1 [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
spu00020  Citrate cycle (TCA cycle)
spu00030  Pentose phosphate pathway
spu00500  Starch and sucrose metabolism
spu00620  Pyruvate metabolism
spu00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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