KEGG   PATHWAY: spu00240
Entry
spu00240                    Pathway                                
Name
Pyrimidine metabolism - Strongylocentrotus purpuratus (purple sea urchin)
Class
Metabolism; Nucleotide metabolism
Pathway map
spu00240  Pyrimidine metabolism
spu00240

Module
spu_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:spu00240]
spu_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:spu00240]
spu_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:spu00240]
spu_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:spu00240]
spu_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:spu00240]
Other DBs
GO: 0006220 0006213
Organism
Strongylocentrotus purpuratus (purple sea urchin) [GN:spu]
Gene
580997  CAD protein [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
589543  dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
580407  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
115918764  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
581681  UMP-CMP kinase isoform X1 [KO:K13800] [EC:2.7.4.14]
576049  UMP-CMP kinase 2, mitochondrial [KO:K13809] [EC:2.7.4.14]
594617  nucleoside diphosphate kinase B [KO:K00940] [EC:2.7.4.6]
590350  nucleoside diphosphate kinase 7 [KO:K00940] [EC:2.7.4.6]
583346  nucleoside diphosphate kinase 6 [KO:K00940] [EC:2.7.4.6]
105438171  nucleoside diphosphate kinase-like [KO:K00940] [EC:2.7.4.6]
588475  adenylate kinase 9 isoform X5 [KO:K18533] [EC:2.7.4.3 2.7.4.6]
587808  soluble calcium-activated nucleotidase 1 [KO:K12304] [EC:3.6.1.6]
580175  ectonucleoside triphosphate diphosphohydrolase 4 isoform X1 [KO:K12305] [EC:3.6.1.6]
115918638  ectonucleoside triphosphate diphosphohydrolase 4-like [KO:K12305] [EC:3.6.1.6]
576801  ectonucleoside triphosphate diphosphohydrolase 5 isoform X1 [KO:K01511] [EC:3.6.1.6]
579858  venom phosphodiesterase 2 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
591232  venom phosphodiesterase 2 isoform X1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
756973  bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]-like [KO:K01518] [EC:3.6.1.17]
756144  bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] [KO:K01518] [EC:3.6.1.17]
575088  CTP synthase 1 [KO:K01937] [EC:6.3.4.2]
588945  uridine-cytidine kinase 2 [KO:K00876] [EC:2.7.1.48]
583574  uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
593129  cytosolic purine 5'-nucleotidase isoform X1 [KO:K01081] [EC:3.1.3.5]
591937  uncharacterized protein LOC591937 isoform X2 [KO:K01081] [EC:3.1.3.5]
753743  5'-nucleotidase [KO:K19970] [EC:3.1.3.5]
590091  5'-nucleotidase [KO:K19970] [EC:3.1.3.5]
105442306  5'-nucleotidase-like [KO:K19970] [EC:3.1.3.5]
105441125  5'-nucleotidase-like isoform X1 [KO:K19970] [EC:3.1.3.5]
583868  uridine phosphorylase 2 [KO:K00757] [EC:2.4.2.3]
115917959  uridine phosphorylase 2-like [KO:K00757] [EC:2.4.2.3]
577497  pseudouridine-metabolizing bifunctional protein C1861.05 [KO:K16330] [EC:4.2.1.70 2.7.1.83]
576495  cytosolic 5'-nucleotidase 3 [KO:K24242] [EC:3.1.3.91]
580762  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
581431  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
577596  ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
594140  ribonucleoside-diphosphate reductase subunit M2 B [KO:K10808] [EC:1.17.4.1]
574993  dCTP pyrophosphatase 1 [KO:K16904] [EC:3.6.1.12]
100889292  HD domain-containing protein 2-like [KO:K07023] [EC:3.1.3.89]
575919  deoxycytidylate deaminase isoform X1 [KO:K01493] [EC:3.5.4.12]
580835  deoxycytidylate deaminase isoform X1 [KO:K01493] [EC:3.5.4.12]
115922182  deoxycytidylate deaminase-like isoform X1 [KO:K01493] [EC:3.5.4.12]
584731  thymidylate kinase [KO:K00943] [EC:2.7.4.9]
574856  probable deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
115919171  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
592241  thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
579588  thymidine kinase, cytosolic isoform X1 [KO:K00857] [EC:2.7.1.21]
583951  thymidine kinase 2, mitochondrial [KO:K00857] [EC:2.7.1.21]
593137  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
575768  dihydropyrimidine dehydrogenase [NADP(+)] [KO:K00207] [EC:1.3.1.2]
579662  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
115918887  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
585985  beta-ureidopropionase isoform X1 [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
spu00030  Pentose phosphate pathway
spu00220  Arginine biosynthesis
spu00250  Alanine, aspartate and glutamate metabolism
spu00280  Valine, leucine and isoleucine degradation
spu00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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