KEGG   PATHWAY: veu00230
Entry
veu00230                    Pathway                                
Name
Purine metabolism - Vibrio europaeus
Class
Metabolism; Nucleotide metabolism
Pathway map
veu00230  Purine metabolism
veu00230

Module
veu_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:veu00230]
veu_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:veu00230]
veu_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:veu00230]
veu_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:veu00230]
veu_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:veu00230]
veu_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:veu00230]
veu_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:veu00230]
Other DBs
GO: 0006163 0042278
Organism
Vibrio europaeus [GN:veu]
Gene
IXK98_00300  [KO:K00892] [EC:2.7.1.73]
IXK98_00920  [KO:K00364] [EC:1.7.1.7]
IXK98_02115  [KO:K09913] [EC:2.4.2.1 2.4.2.2]
IXK98_02385  cyaB; class IV adenylate cyclase [KO:K05873] [EC:4.6.1.1]
IXK98_02980  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
IXK98_02985  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
IXK98_02995  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
IXK98_03045  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
IXK98_03050  [KO:K01429] [EC:3.5.1.5]
IXK98_03055  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
IXK98_03110  [KO:K01483] [EC:4.3.2.3]
IXK98_03115  alc; allantoicase [KO:K01477] [EC:3.5.3.4]
IXK98_03120  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
IXK98_03125  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
IXK98_03130  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
IXK98_04495  [KO:K01951] [EC:6.3.5.2]
IXK98_04900  [KO:K01488] [EC:3.5.4.4]
IXK98_05935  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
IXK98_06665  [KO:K11751] [EC:3.1.3.5 3.6.1.45]
IXK98_06680  [KO:K01515] [EC:3.6.1.13 3.6.1.-]
IXK98_07790  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
IXK98_08095  [KO:K01081] [EC:3.1.3.5]
IXK98_08905  [KO:K01589] [EC:6.3.4.18]
IXK98_08910  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
IXK98_09160  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
IXK98_09180  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
IXK98_09190  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
IXK98_09570  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
IXK98_09575  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
IXK98_09810  [KO:K01939] [EC:6.3.4.4]
IXK98_10005  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
IXK98_10015  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
IXK98_10030  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
IXK98_10345  [KO:K01519] [EC:3.6.1.66]
IXK98_10605  apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH [KO:K01525] [EC:3.6.1.41]
IXK98_10780  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
IXK98_10925  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
IXK98_11395  yjjX; inosine/xanthosine triphosphatase [KO:K01529]
IXK98_11435  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
IXK98_11540  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
IXK98_11915  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
IXK98_12135  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
IXK98_12140  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
IXK98_12425  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
IXK98_12450  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
IXK98_12455  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
IXK98_12565  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
IXK98_12985  [KO:K01119] [EC:3.1.4.16 3.1.3.6]
IXK98_13075  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
IXK98_13310  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
IXK98_14155  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
IXK98_14175  [KO:K00892] [EC:2.7.1.73]
IXK98_14805  [KO:K03651] [EC:3.1.4.53]
IXK98_15275  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
IXK98_16945  [KO:K01923] [EC:6.3.2.6]
IXK98_17000  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
IXK98_17005  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
IXK98_17280  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
IXK98_17285  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
IXK98_18825  yfbR; 5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
IXK98_18845  [KO:K01129] [EC:3.1.5.1]
IXK98_18850  [KO:K21053] [EC:3.5.4.2]
IXK98_19860  [KO:K11751] [EC:3.1.3.5 3.6.1.45]
IXK98_19905  [KO:K00948] [EC:2.7.6.1]
IXK98_20195  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
IXK98_20765  tet(34); oxytetracycline resistance phosphoribosyltransferase domain-containing protein Tet(34) [KO:K00769] [EC:2.4.2.22]
IXK98_20950  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
IXK98_20955  [KO:K01839] [EC:5.4.2.7]
IXK98_21235  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
IXK98_21245  nudF; ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
IXK98_21510  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
IXK98_21515  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
IXK98_23390  [KO:K05851] [EC:4.6.1.1]
IXK98_23510  gppA; guanosine-5'-triphosphate,3'-diphosphate diphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
IXK98_24090  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
IXK98_24095  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
IXK98_24105  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
veu00030  Pentose phosphate pathway
veu00220  Arginine biosynthesis
veu00250  Alanine, aspartate and glutamate metabolism
veu00260  Glycine, serine and threonine metabolism
veu00340  Histidine metabolism
veu00630  Glyoxylate and dicarboxylate metabolism
veu00730  Thiamine metabolism
veu00740  Riboflavin metabolism
veu00790  Folate biosynthesis
KO pathway
ko00230   

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