KEGG   PATHWAY: vum00564
Entry
vum00564                    Pathway                                
Name
Glycerophospholipid metabolism - Vigna umbellata (ricebean)
Class
Metabolism; Lipid metabolism
Pathway map
vum00564  Glycerophospholipid metabolism
vum00564

Module
vum_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:vum00564]
Other DBs
GO: 0006650
Organism
Vigna umbellata (ricebean) [GN:vum]
Gene
124820783  glycerol-3-phosphate dehydrogenase [NAD(+)]-like isoform X1 [KO:K00006] [EC:1.1.1.8]
124822654  glycerol-3-phosphate dehydrogenase [NAD(+)]-like [KO:K00006] [EC:1.1.1.8]
124835537  glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic [KO:K00006] [EC:1.1.1.8]
124846642  probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [KO:K00006] [EC:1.1.1.8]
124846854  glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic [KO:K00006] [EC:1.1.1.8]
124842494  probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [KO:K00006] [EC:1.1.1.8]
124845543  glycerol-3-phosphate dehydrogenase SDP6, mitochondrial-like [KO:K00111] [EC:1.1.5.3]
124847291  glycerol-3-phosphate dehydrogenase SDP6, mitochondrial-like isoform X1 [KO:K00111] [EC:1.1.5.3]
124820504  glycerol-3-phosphate acyltransferase 9 [KO:K13506] [EC:2.3.1.15]
124828091  glycerol-3-phosphate acyltransferase 9-like isoform X1 [KO:K13506] [EC:2.3.1.15]
124846573  glycerol-3-phosphate acyltransferase, chloroplastic isoform X1 [KO:K00630] [EC:2.3.1.15]
124820736  glycerol-3-phosphate 2-O-acyltransferase 6-like [KO:K13508] [EC:2.3.1.15 2.3.1.198]
124832911  glycerol-3-phosphate acyltransferase 1 [KO:K13508] [EC:2.3.1.15 2.3.1.198]
124845676  glycerol-3-phosphate 2-O-acyltransferase 6-like [KO:K13508] [EC:2.3.1.15 2.3.1.198]
124824049  glycerol-3-phosphate acyltransferase 5-like [KO:K13508] [EC:2.3.1.15 2.3.1.198]
124838869  glycerol-3-phosphate acyltransferase 1-like [KO:K13508] [EC:2.3.1.15 2.3.1.198]
124829582  probable glycerol-3-phosphate acyltransferase 3 [KO:K13508] [EC:2.3.1.15 2.3.1.198]
124841862  probable glycerol-3-phosphate acyltransferase 3 [KO:K13508] [EC:2.3.1.15 2.3.1.198]
124843757  probable glycerol-3-phosphate acyltransferase 8 [KO:K13508] [EC:2.3.1.15 2.3.1.198]
124840278  LOW QUALITY PROTEIN: 1-acyl-sn-glycerol-3-phosphate acyltransferase BAT2, chloroplastic [KO:K00655] [EC:2.3.1.51]
124825202  1-acyl-sn-glycerol-3-phosphate acyltransferase 3-like [KO:K13523] [EC:2.3.1.51 2.3.1.-]
124827399  1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [KO:K13523] [EC:2.3.1.51 2.3.1.-]
124842830  1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [KO:K13523] [EC:2.3.1.51 2.3.1.-]
124830673  1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [KO:K13523] [EC:2.3.1.51 2.3.1.-]
124820318  probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 isoform X1 [KO:K13513] [EC:2.3.1.- 2.3.1.51]
124831190  LOW QUALITY PROTEIN: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 [KO:K13513] [EC:2.3.1.- 2.3.1.51]
124838462  lysophospholipid acyltransferase 1-like [KO:K13519] [EC:2.3.1.51 2.3.1.23 2.3.1.-]
124838548  lysophospholipid acyltransferase 1-like [KO:K13519] [EC:2.3.1.51 2.3.1.23 2.3.1.-]
124835292  triacylglycerol lipase SDP1-like [KO:K14674] [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51]
124839678  triacylglycerol lipase SDP1-like [KO:K14674] [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51]
124846211  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like isoform X1 [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
124824375  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
124824376  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like isoform X1 [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
124824378  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like isoform X1 [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
124841351  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
124846290  phosphatidate phosphatase PAH2-like isoform X1 [KO:K15728] [EC:3.1.3.4]
124835465  phosphatidate phosphatase PAH1-like [KO:K15728] [EC:3.1.3.4]
124832033  phosphatidate phosphatase PAH1 [KO:K15728] [EC:3.1.3.4]
124832645  lipid phosphate phosphatase 2-like [KO:K18693] [EC:3.6.1.75 3.1.3.4]
124832649  lipid phosphate phosphatase 2-like [KO:K18693] [EC:3.6.1.75 3.1.3.4]
124824564  lipid phosphate phosphatase 2-like isoform X1 [KO:K18693] [EC:3.6.1.75 3.1.3.4]
124828235  lipid phosphate phosphatase 2-like [KO:K18693] [EC:3.6.1.75 3.1.3.4]
124828236  lipid phosphate phosphatase 2-like [KO:K18693] [EC:3.6.1.75 3.1.3.4]
124820462  diacylglycerol kinase 1 [KO:K00901] [EC:2.7.1.107]
124834422  diacylglycerol kinase 2 [KO:K00901] [EC:2.7.1.107]
124834918  diacylglycerol kinase 4-like [KO:K00901] [EC:2.7.1.107]
124848850  diacylglycerol kinase 7-like [KO:K00901] [EC:2.7.1.107]
124827729  diacylglycerol kinase 5-like [KO:K00901] [EC:2.7.1.107]
124827768  diacylglycerol kinase 1-like isoform X1 [KO:K00901] [EC:2.7.1.107]
124840754  diacylglycerol kinase 5-like [KO:K00901] [EC:2.7.1.107]
124832301  non-specific phospholipase C2 [KO:K01114] [EC:3.1.4.3]
124825350  non-specific phospholipase C6 [KO:K01114] [EC:3.1.4.3]
124838370  non-specific phospholipase C1 [KO:K01114] [EC:3.1.4.3]
124832205  phospholipase D alpha 1 [KO:K01115] [EC:3.1.4.4]
124843821  phospholipase D alpha 4-like [KO:K01115] [EC:3.1.4.4]
124845450  phospholipase D gamma 1-like [KO:K01115] [EC:3.1.4.4]
124834686  phospholipase D alpha 1-like [KO:K01115] [EC:3.1.4.4]
124834687  phospholipase D alpha 1-like [KO:K01115] [EC:3.1.4.4]
124823237  phospholipase D zeta 1-like [KO:K01115] [EC:3.1.4.4]
124835570  phospholipase D alpha 1 [KO:K01115] [EC:3.1.4.4]
124848324  phospholipase D delta [KO:K01115] [EC:3.1.4.4]
124849051  phospholipase D alpha 4-like [KO:K01115] [EC:3.1.4.4]
124825649  phospholipase D delta-like [KO:K01115] [EC:3.1.4.4]
124838815  phospholipase D delta-like [KO:K01115] [EC:3.1.4.4]
124827486  LOW QUALITY PROTEIN: phospholipase D beta 1-like [KO:K01115] [EC:3.1.4.4]
124829014  phospholipase D zeta 1-like [KO:K01115] [EC:3.1.4.4]
124843230  phospholipase D gamma 1-like [KO:K01115] [EC:3.1.4.4]
124840099  phospholipase D Y-like [KO:K16860] [EC:3.1.4.4]
124844436  lysophospholipid acyltransferase LPEAT1-like [KO:K13510] [EC:2.3.1.23 2.3.1.67]
124839812  lysophospholipid acyltransferase LPEAT2-like [KO:K13510] [EC:2.3.1.23 2.3.1.67]
124839813  lysophospholipid acyltransferase LPEAT2-like [KO:K13510] [EC:2.3.1.23 2.3.1.67]
124828019  lysophospholipid acyltransferase LPEAT1 isoform X1 [KO:K13510] [EC:2.3.1.23 2.3.1.67]
124833740  phospholipase A(1) DAD1, chloroplastic-like [KO:K16818] [EC:3.1.1.32]
124833742  phospholipase A(1) DAD1, chloroplastic-like [KO:K16818] [EC:3.1.1.32]
124840522  phospholipase A(1) DAD1, chloroplastic-like [KO:K16818] [EC:3.1.1.32]
124842075  phospholipase A(1) DAD1, chloroplastic-like [KO:K16818] [EC:3.1.1.32]
124842076  phospholipase A(1) DAD1, chloroplastic-like [KO:K16818] [EC:3.1.1.32]
124848158  lecithin-cholesterol acyltransferase-like 4 [KO:K22389] [EC:3.1.1.32]
124825301  phospholipase A(1) LCAT3 [KO:K22389] [EC:3.1.1.32]
124834604  acyl-protein thioesterase 2-like [KO:K06130] [EC:3.1.1.5]
124835588  acyl-protein thioesterase 1 homolog 1-like [KO:K06130] [EC:3.1.1.5]
124830399  acyl-protein thioesterase 2-like [KO:K06130] [EC:3.1.1.5]
124843744  acyl-protein thioesterase 1 [KO:K06130] [EC:3.1.1.5]
124846896  glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like [KO:K18696] [EC:3.1.4.46]
124830682  glycerophosphodiester phosphodiesterase GDPD6 isoform X1 [KO:K01126] [EC:3.1.4.46]
124830684  glycerophosphodiester phosphodiesterase GDPD6-like isoform X1 [KO:K01126] [EC:3.1.4.46]
124830685  glycerophosphodiester phosphodiesterase GDPD6-like [KO:K01126] [EC:3.1.4.46]
124820599  probable choline kinase 3 isoform X1 [KO:K14156] [EC:2.7.1.32 2.7.1.82]
124832838  probable choline kinase 2 [KO:K14156] [EC:2.7.1.32 2.7.1.82]
124821110  probable choline kinase 2 isoform X1 [KO:K14156] [EC:2.7.1.32 2.7.1.82]
124833964  probable choline kinase 2 [KO:K14156] [EC:2.7.1.32 2.7.1.82]
124838671  choline-phosphate cytidylyltransferase 2-like [KO:K00968] [EC:2.7.7.15]
124838915  choline-phosphate cytidylyltransferase 1-like [KO:K00968] [EC:2.7.7.15]
124847935  LOW QUALITY PROTEIN: choline/ethanolaminephosphotransferase 1-like [KO:K00993] [EC:2.7.8.1]
124833164  serine decarboxylase-like [KO:K25193] [EC:4.1.1.-]
124846258  serine decarboxylase 1-like [KO:K25193] [EC:4.1.1.-]
124847082  serine decarboxylase 1-like isoform X1 [KO:K25193] [EC:4.1.1.-]
124824685  probable ethanolamine kinase isoform X1 [KO:K00894] [EC:2.7.1.82]
124820892  ethanolamine-phosphate cytidylyltransferase-like isoform X1 [KO:K00967] [EC:2.7.7.14]
124846930  ethanolamine-phosphate cytidylyltransferase [KO:K00967] [EC:2.7.7.14]
124821540  LOW QUALITY PROTEIN: phosphomethylethanolamine N-methyltransferase-like [KO:K05929] [EC:2.1.1.103]
124847970  phosphoethanolamine N-methyltransferase-like [KO:K05929] [EC:2.1.1.103]
124847971  phosphoethanolamine N-methyltransferase-like [KO:K05929] [EC:2.1.1.103]
124835912  phosphatidyl-N-methylethanolamine N-methyltransferase [KO:K00550] [EC:2.1.1.71]
124845137  phosphatidate cytidylyltransferase 1-like [KO:K00981] [EC:2.7.7.41]
124835089  phosphatidate cytidylyltransferase 4, chloroplastic-like [KO:K00981] [EC:2.7.7.41]
124839509  phosphatidate cytidylyltransferase 1-like [KO:K00981] [EC:2.7.7.41]
124823035  CDP-diacylglycerol--serine O-phosphatidyltransferase 1-like isoform X1 [KO:K08730] [EC:2.7.8.29]
124846967  phosphatidylserine decarboxylase proenzyme 2-like isoform X1 [KO:K01613] [EC:4.1.1.65]
124839750  phosphatidylserine decarboxylase proenzyme 1, mitochondrial isoform X1 [KO:K01613] [EC:4.1.1.65]
124836592  phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial-like isoform X1 [KO:K01094] [EC:3.1.3.27]
124836594  phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial-like [KO:K01094] [EC:3.1.3.27]
124833672  cardiolipin synthase (CMP-forming), mitochondrial isoform X1 [KO:K08744] [EC:2.7.8.41]
124826154  N-acylphosphatidylethanolamine synthase-like isoform X1 [KO:K13511] [EC:2.3.1.-]
124826155  N-acylphosphatidylethanolamine synthase-like isoform X1 [KO:K13511] [EC:2.3.1.-]
124826322  tafazzin [KO:K13511] [EC:2.3.1.-]
124846247  probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 [KO:K00999] [EC:2.7.8.11]
Compound
C00040  Acyl-CoA
C00065  L-Serine
C00084  Acetaldehyde
C00093  sn-Glycerol 3-phosphate
C00111  Glycerone phosphate
C00114  Choline
C00157  Phosphatidylcholine
C00189  Ethanolamine
C00269  CDP-diacylglycerol
C00307  CDP-choline
C00344  Phosphatidylglycerol
C00346  Ethanolamine phosphate
C00350  Phosphatidylethanolamine
C00416  Phosphatidate
C00513  CDP-glycerol
C00570  CDP-ethanolamine
C00588  Choline phosphate
C00623  sn-Glycerol 1-phosphate
C00641  1,2-Diacyl-sn-glycerol
C00670  sn-Glycero-3-phosphocholine
C00681  1-Acyl-sn-glycerol 3-phosphate
C01194  1-Phosphatidyl-D-myo-inositol
C01210  N-Methylethanolamine phosphate
C01233  sn-Glycero-3-phosphoethanolamine
C01241  Phosphatidyl-N-methylethanolamine
C01996  Acetylcholine
C02737  Phosphatidylserine
C03372  Acylglycerone phosphate
C03819  1-Acylglycerophosphoinositol
C03872  L-Serine-phosphoethanolamine
C03892  Phosphatidylglycerophosphate
C03974  2-Acyl-sn-glycerol 3-phosphate
C04230  1-Acyl-sn-glycero-3-phosphocholine
C04233  2-Acyl-sn-glycero-3-phosphocholine
C04308  Phosphatidyl-N-dimethylethanolamine
C04438  1-Acyl-sn-glycero-3-phosphoethanolamine
C04590  3-(O-Geranylgeranyl)-sn-glycerol 1-phosphate
C04638  2,3-Bis-(O-geranylgeranyl)-sn-glycerol 1-phosphate
C05973  2-Acyl-sn-glycero-3-phosphoethanolamine
C05974  2-Acyl-sn-glycero-3-phosphoserine
C05976  Aminoacyl-phosphatidylglycerol
C05980  Cardiolipin
C06771  Triethanolamine
C06772  Diethanolamine
C13482  Phosphodimethylethanolamine
C18059  CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol
C18125  1-Acyl-sn-glycero-3-phosphoserine
C18126  1-Acyl-sn-glycero-3-phosphoglycerol
C18129  Monolysocardiolipin
C18168  Diacylglycerylhomoserine
C18169  Diacylglyceryl-N,N,N-trimethylhomoserine
C20466  2,3-Bis-(O-geranylgeranyl)-sn-glycero-1-phospho-L-serine
C20518  2,3-Bis-(O-phytanyl)-sn-glycerol 1-phosphate
C22340  Heptaprenylglyceryl phosphate
C22341  Heptaprenylglycerol
C22342  Diacetylheptaprenylglycerol
Reference
PMID:1512203
  Authors
Racenis PV, Lai JL, Das AK, Mullick PC, Hajra AK, Greenberg ML.
  Title
The acyl dihydroxyacetone phosphate pathway enzymes for glycerolipid biosynthesis are present in the yeast Saccharomyces cerevisiae.
  Journal
J Bacteriol 174:5702-10 (1992)
DOI:10.1128/JB.174.17.5702-5710.1992
Reference
PMID:10092508
  Authors
Taniyama Y, Shibata S, Kita S, Horikoshi K, Fuse H, Shirafuji H, Sumino Y, Fujino M.
  Title
Cloning and expression of a novel lysophospholipase which structurally resembles lecithin cholesterol acyltransferase.
  Journal
Biochem Biophys Res Commun 257:50-6 (1999)
DOI:10.1006/bbrc.1999.0411
Reference
PMID:10542045
  Authors
Athenstaedt K, Daum G.
  Title
Phosphatidic acid, a key intermediate in lipid metabolism.
  Journal
Eur J Biochem 266:1-16 (1999)
DOI:10.1046/j.1432-1327.1999.00822.x
Reference
PMID:12431977
  Authors
Shields DJ, Lehner R, Agellon LB, Vance DE.
  Title
Membrane topography of human phosphatidylethanolamine N-methyltransferase.
  Journal
J Biol Chem 278:2956-62 (2003)
DOI:10.1074/jbc.M210904200
Reference
PMID:14663079
  Authors
Martinez-Morales F, Schobert M, Lopez-Lara IM, Geiger O.
  Title
Pathways for phosphatidylcholine biosynthesis in bacteria.
  Journal
Microbiology 149:3461-71 (2003)
DOI:10.1099/mic.0.26522-0
Reference
PMID:15522832
  Authors
Burgermeister M, Birner-Grunberger R, Nebauer R, Daum G.
  Title
Contribution of different pathways to the supply of phosphatidylethanolamine and phosphatidylcholine to mitochondrial membranes of the yeast Saccharomyces cerevisiae.
  Journal
Biochim Biophys Acta 1686:161-8 (2004)
DOI:10.1016/j.bbalip.2004.09.007
Reference
PMID:1649829
  Authors
Hsu L, Jackowski S, Rock CO
  Title
Isolation and characterization of Escherichia coli K-12 mutants lacking both 2-acyl-glycerophosphoethanolamine acyltransferase and acyl-acyl carrier protein synthetase activity.
  Journal
J Biol Chem 266:13783-8 (1991)
Reference
PMID:10938271
  Authors
Stone SJ, Vance JE.
  Title
Phosphatidylserine synthase-1 and -2 are localized to mitochondria-associated membranes.
  Journal
J Biol Chem 275:34534-40 (2000)
DOI:10.1074/jbc.M002865200
Related
pathway
vum00010  Glycolysis / Gluconeogenesis
vum00260  Glycine, serine and threonine metabolism
vum00561  Glycerolipid metabolism
vum00562  Inositol phosphate metabolism
vum00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
vum00565  Ether lipid metabolism
vum00620  Pyruvate metabolism
KO pathway
ko00564   
LinkDB

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