KEGG Orthology (KO) - Rhizobium sp. Kim5

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
     00410 beta-Alanine metabolism [PATH:rhk00410]
     00430 Taurine and hypotaurine metabolism [PATH:rhk00430]
     00440 Phosphonate and phosphinate metabolism [PATH:rhk00440]
     00450 Selenocompound metabolism [PATH:rhk00450]
     00460 Cyanoamino acid metabolism [PATH:rhk00460]
     00470 D-Amino acid metabolism [PATH:rhk00470]
       Kim5_CH01569 alr; alanine racemase
       Kim5_PC00445 dadX; alanine racemase
       Kim5_CH02117 dat; D-alanine aminotransferase
       Kim5_CH02592 ddlA; D-alanine--D-alanine ligase A
       Kim5_CH03056 ddl; D-alanine--D-alanine ligase
       Kim5_CH02433 glsA; glutaminase
       Kim5_CH02417 purQ; phosphoribosylformylglycinamidine synthase 1
       Kim5_CH02439 murI; glutamate racemase
       Kim5_CH03062 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase
       Kim5_CH02475 L-Ala-DL-Glu epimerase protein
       Kim5_CH02967 Asp/Glu/hydantoin racemase protein
       Kim5_PD00590 alanine racemase domain-containing protein
       Kim5_CH04318 dapF; diaminopimelate epimerase
       Kim5_CH04147 lysA; diaminopimelate decarboxylase
       Kim5_PD00045 dihydrodipicolinate synthetase-like protein
       Kim5_PC00444 dadA; D-amino acid dehydrogenase small subunit
K01775 alr; alanine racemase [EC:5.1.1.1]
K01775 alr; alanine racemase [EC:5.1.1.1]
K00824 dat; D-alanine transaminase [EC:2.6.1.21]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01425 glsA; glutaminase [EC:3.5.1.2]
K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
K01779 racD; aspartate racemase [EC:5.1.1.13]
K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
     00480 Glutathione metabolism [PATH:rhk00480]
 
   09107 Glycan biosynthesis and metabolism
     00510 N-Glycan biosynthesis
     00513 Various types of N-glycan biosynthesis
     00512 Mucin type O-glycan biosynthesis
     00515 Mannose type O-glycan biosynthesis
     00514 Other types of O-glycan biosynthesis
     00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
     00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
     00533 Glycosaminoglycan biosynthesis - keratan sulfate
     00531 Glycosaminoglycan degradation
     00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
     00601 Glycosphingolipid biosynthesis - lacto and neolacto series
     00603 Glycosphingolipid biosynthesis - globo and isoglobo series
     00604 Glycosphingolipid biosynthesis - ganglio series
     00511 Other glycan degradation [PATH:rhk00511]
     00540 Lipopolysaccharide biosynthesis [PATH:rhk00540]
     00542 O-Antigen repeat unit biosynthesis
     00541 O-Antigen nucleotide sugar biosynthesis [PATH:rhk00541]
     00550 Peptidoglycan biosynthesis [PATH:rhk00550]
       Kim5_CH00612 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       Kim5_CH03058 murB; UDP-N-acetylenolpyruvoylglucosamine reductase
       Kim5_CH03059 murC; UDP-N-acetylmuramate--L-alanine ligase
       Kim5_CH03062 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase
       Kim5_CH03065 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
       Kim5_CH02592 ddlA; D-alanine--D-alanine ligase A
       Kim5_CH03056 ddl; D-alanine--D-alanine ligase
       Kim5_CH03064 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       Kim5_CH02073 uppS; undecaprenyl pyrophosphate synthase
       Kim5_CH00323 uppP; undecaprenyl-diphosphatase
       Kim5_PB00088 phosphatidic acid phosphatase protein
       Kim5_CH03063 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
       Kim5_CH03060 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
       Kim5_CH04378 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
       Kim5_CH01425 penicillin binding protein 1A
       Kim5_CH00162 penicillin binding protein 1A
       Kim5_CH01774 mrcA; penicillin-binding protein 1A
       Kim5_CH01257 penicillin binding protein 1A
       Kim5_PB00009 penicillin-binding protein 1C
       Kim5_CH03066 cell division FtsI/penicillin-binding protein
       Kim5_CH01058 serine-type D-Ala-D-Ala carboxypeptidase protein
       Kim5_CH02271 serine-type D-Ala-D-Ala carboxypeptidase protein
       Kim5_CH02469 serine-type D-Ala-D-Ala carboxypeptidase protein
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
     00552 Teichoic acid biosynthesis [PATH:rhk00552]
     00571 Lipoarabinomannan (LAM) biosynthesis
     00572 Arabinogalactan biosynthesis - Mycobacterium
     00543 Exopolysaccharide biosynthesis [PATH:rhk00543]
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
   09161 Cancer: overview
 
   09162 Cancer: specific types
 
   09172 Infectious disease: viral
 
   09171 Infectious disease: bacterial
 
   09174 Infectious disease: parasitic
 
   09163 Immune disease
 
   09164 Neurodegenerative disease
 
   09165 Substance dependence
 
   09166 Cardiovascular disease
 
   09167 Endocrine and metabolic disease
 
   09175 Drug resistance: antimicrobial
     01501 beta-Lactam resistance [PATH:rhk01501]
     01502 Vancomycin resistance [PATH:rhk01502]
       Kim5_CH02592 ddlA; D-alanine--D-alanine ligase A
       Kim5_CH03056 ddl; D-alanine--D-alanine ligase
       Kim5_CH01569 alr; alanine racemase
       Kim5_PC00445 dadX; alanine racemase
       Kim5_CH03064 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       Kim5_CH03063 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
       Kim5_CH03060 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
     01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rhk01503]
 
   09176 Drug resistance: antineoplastic
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:rhk01000]
     01001 Protein kinases [BR:rhk01001]
     01009 Protein phosphatases and associated proteins [BR:rhk01009]
     01002 Peptidases and inhibitors [BR:rhk01002]
     01003 Glycosyltransferases [BR:rhk01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:rhk01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhk01011]
       Kim5_CH00612 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       Kim5_CH03058 murB; UDP-N-acetylenolpyruvoylglucosamine reductase
       Kim5_CH03059 murC; UDP-N-acetylmuramate--L-alanine ligase
       Kim5_CH03062 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase
       Kim5_CH03065 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
       Kim5_CH02592 ddlA; D-alanine--D-alanine ligase A
       Kim5_CH03056 ddl; D-alanine--D-alanine ligase
       Kim5_CH01569 alr; alanine racemase
       Kim5_PC00445 dadX; alanine racemase
       Kim5_CH02439 murI; glutamate racemase
       Kim5_CH03063 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
       Kim5_CH03060 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
       Kim5_CH00323 uppP; undecaprenyl-diphosphatase
       Kim5_PB00088 phosphatidic acid phosphatase protein
       Kim5_CH00405 mviN; virulence factor membrane protein MviN
       Kim5_CH01425 penicillin binding protein 1A
       Kim5_CH00162 penicillin binding protein 1A
       Kim5_CH01774 mrcA; penicillin-binding protein 1A
       Kim5_CH01257 penicillin binding protein 1A
       Kim5_PB00009 penicillin-binding protein 1C
       Kim5_CH03066 cell division FtsI/penicillin-binding protein
       Kim5_CH01058 serine-type D-Ala-D-Ala carboxypeptidase protein
       Kim5_CH02271 serine-type D-Ala-D-Ala carboxypeptidase protein
       Kim5_CH02469 serine-type D-Ala-D-Ala carboxypeptidase protein
       Kim5_CH04378 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
       Kim5_CH02505 L,D-transpeptidase domain-containing protein
       Kim5_CH01636 L,D-transpeptidase domain-containing protein
       Kim5_CH00192 penicillin-insensitive murein endopeptidase protein
       Kim5_CH03261 sortase-like protein
       Kim5_CH01517 lytic transglycosylase-like protein
       Kim5_CH00010 lytic murein transglycosylase MltA protein
       Kim5_CH03904 lytic transglycosylase SLT domain-containing protein
       Kim5_CH01580 YceG-like family protein
       Kim5_CH00319 rare lipoprotein A precursor protein
       Kim5_CH02272 rare lipoprotein A precursor protein
       Kim5_CH01773 N-acetylmuramoyl-l-alanine amidase protein
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
K03980 murJ; putative peptidoglycan lipid II flippase
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
K21470 ycbB; L,D-transpeptidase YcbB
K21470 ycbB; L,D-transpeptidase YcbB
K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
K07284 srtA; sortase A [EC:3.4.22.70]
K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
     01004 Lipid biosynthesis proteins [BR:rhk01004]
     01008 Polyketide biosynthesis proteins [BR:rhk01008]
     01006 Prenyltransferases [BR:rhk01006]
     01007 Amino acid related enzymes [BR:rhk01007]
     00199 Cytochrome P450 [BR:rhk00199]
     00194 Photosynthesis proteins [BR:rhk00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 25, 2024