SSDB Best Search Result

Entry:upa:UPA3_0328 (292 a.a.)
Name:pseudouridylate synthase, 23S RNA-specific
KO:K06180 23S rRNA pseudouridine1911/1915/1917 synthase
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Search Result : 199 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
mpn:MPN_292 ribosomal large subunit pseudouridine synth K06180     309      737     0.390      290     
mge:MG_209 pseudouridine synthase, RluA family          K06180     308      728     0.377      289     
ljo:LJ_1186 ribosomal large subunit pseudouridine synth K06180     304      676     0.406      293     
llm:llmg_1524 ribosomal large subunit pseudouridine syn K06180     301      655     0.399      296     
sao:SAOUHSC_01163 hypothetical protein                  K06180     305      652     0.375      296     
sau:SA1040 conserved hypothetical protein               K06180     305      652     0.375      296     
bsu:BSU15460 RNA pseudouridine synthase YlyB            K06180     303      649     0.384      297     
ser:SERP0763 ribosomal large subunit pseudouridine synt K06180     305      647     0.381      294     
lla:L25787 pseudouridine synthase                       K06180     301      647     0.391      294     
spn:SP_0929 ribosomal large subunit pseudouridine synth K06180     295      636     0.386      293     
spy:SPy_0827 conserved hypothetical protein             K06180     296      634     0.388      299     
spr:spr0830 23S rRNA pseudouridine synthase (supresses  K06180     295      633     0.386      293     
lmo:lmo1843 hypothetical protein                        K06180     303      626     0.366      298     
bce:BC3892 Ribosomal large subunit pseudouridine syntha K06180     302      625     0.373      295     
lin:lin1957 similar to conserved hypothetical proteins  K06180     302      621     0.369      293     
btk:BT9727_3634 ribosomal large subunit pseudouridine s K06180     302      620     0.366      295     
fnu:FN1372 Ribosomal large subunit pseudouridine syntha K06180     319      618     0.391      297     
ban:BA_4031 ribosomal large subunit pseudouridine synth K06180     302      617     0.366      295     
smu:SMU_854 putative pseudouridylate synthase           K06180     296      610     0.381      294     
cbo:CBO1476 putative ribosomal large subunit pseudourid K06180     305      600     0.372      298     
cpe:CPE1850 conserved hypothetical protein              K06180     306      596     0.364      294     
cac:CA_C2114 Predicted pseudouridylate synthase, YLYB B K06180     305      581     0.353      300     
lpl:lp_1781 RNA pseudouridylate synthase                K06180     307      580     0.371      291     
cdf:CD630_25960 putative pseudouridylate synthase, RluC K06180     303      579     0.361      296     
tma:TM0462 conserved hypothetical protein               K06180     311      570     0.347      297     
lcb:LCABL_16810 Pseudouridine synthase                  K06180     307      568     0.346      295     
cau:Caur_0901 pseudouridine synthase, RluA family       K06180     316      556     0.334      296     
rco:RC1310 sfhB protein homolog                         K06180     313      552     0.357      308     
hth:HTH_0706 pseudouridine synthase                     K06180     318      548     0.330      306     
ftu:FTT_1245 ribosomal large subunit pseudouridine synt K06180     332      546     0.350      300     
mta:Moth_0869 ribosomal large subunit pseudouridine syn K06180     306      536     0.339      295     
gvi:glr0073 ORF_ID:glr0073; probable pseudouridine synt K06180     310      531     0.343      300     
syf:Synpcc7942_1112 ribosomal large subunit pseudouridi K06180     313      529     0.338      302     
syc:syc0437_d ribosomal large subunit pseudouridine syn K06180     313      529     0.338      302     
bfr:BF0489 ribosomal large subunit pseudouridine syntha K06180     357      528     0.330      312     
npu:Npun_R3812 pseudouridine synthase, RluA family      K06180     345      527     0.340      297     
bth:BT_3712 ribosomal large subunit pseudouridine synth K06180     357      516     0.324      312     
nme:NMB0704 ribosomal large subunit pseudouridine synth K06180     374      516     0.316      307     
ngo:NGO_0278 pseudouridine synthase                     K06180     374      514     0.316      307     
lpn:lpg1333 ribosomal large subunit pseudouridine synth K06180     321      510     0.325      311     
fps:FP0651 Probable 23S rRNA pseudouridine synthase     K06180     347      509     0.323      310     
cpn:CPn_0719 predicted Pseudouridine Synthase           K06180     325      507     0.324      306     
ana:alr0522 probable pseudouridine synthase             K06180     312      503     0.332      301     
buc:BU401 ribosomal large subunit pseudouridine synthas K06180     312      502     0.320      303     
aae:aq_1758 hypothetical protein                        K06180     316      501     0.328      296     
pma:Pro_0219 23S RNA-specific pseudouridylate synthase  K06180     318      499     0.328      296     
rpr:RP846 SFHB PROTEIN HOMOLOG (sfhB)                   K06180     313      496     0.319      310     
mmp:MMP1010 Pseudouridine synthase:Pseudouridine syntha K06180     297      495     0.328      293     
aci:ACIAD2897 ribosomal large subunit pseudouridine syn K06180     350      490     0.314      306     
sme:SMc00647 Putative ribosomal large subunit pseudouri K06180     343      490     0.321      324     
ctr:CT_658 RNA pseudouridine synthase                   K06180     334      488     0.315      298     
pmu:PM1719 SfB                                          K06180     324      487     0.301      306     
cte:CT1299 ribosomal large subunit pseudouridine syntha K06180     329      487     0.309      317     
syn:slr1629 hypothetical protein                        K06180     327      484     0.313      297     
ctb:CTL0027 ribosomal large subunit pseudouridine synth K06180     335      483     0.315      298     
acb:A1S_0841 ribosomal large subunit pseudouridine synt K06180     350      482     0.312      304     
apl:APL_1122 ribosomal large subunit pseudouridine synt K06180     325      482     0.298      305     
vch:VC_2028 ribosomal large subunit pseudouridine synth K06179     315      482     0.312      304     
cje:Cj1280c pseudouridine synthase                      K06180     322      481     0.311      296     
eca:ECA3347 ribosomal large subunit pseudouridine synth K06180     325      479     0.297      306     
yen:YE0891 ribosomal large subunit pseudouridine syntha K06180     325      478     0.303      307     
psb:Psyr_0726 ribosomal large subunit pseudouridine syn K06180     320      478     0.298      312     
hdu:HD_0469 pseudouridine synthase                      K06180     325      477     0.305      305     
ecs:ECs_3457 ribosomal large subunit pseudouridine synt K06180     326      477     0.296      307     
eco:b2594 23S rRNA pseudouridine(1911/1915/1917) syntha K06180     326      476     0.300      307     
ecj:JW2576 23S rRNA pseudouridine synthase              K06180     326      476     0.300      307     
sfl:SF2653 23S rRNA pseudouridine synthase D            K06180     326      475     0.296      307     
ece:Z3888 suppressor of ftsH mutation                   K06180     326      475     0.296      307     
pst:PSPTO_0827 ribosomal large subunit pseudouridine sy K06180     320      474     0.295      312     
rle:RL3765 putative ribosomal large subunit pseudouridi K06180     341      473     0.301      326     
vfi:VF_0564 23S rRNA pseudouridine synthase             K06180     324      471     0.303      307     
atu:Atu2443 ribosomal large subunit pseudouridine synth K06180     340      471     0.304      326     
cro:ROD_25361 ribosomal large subunit pseudouridine syn K06180     326      468     0.288      306     
yps:YPTB0846 pseudouridine synthase (pseudouridines 191 K06180     325      468     0.300      307     
vpa:VP2061 23S rRNA ribosomal pseudouridine synthase    K06179     315      468     0.327      309     
ddd:Dda3937_01572 23S rRNA pseudouridine synthase       K06180     325      467     0.293      307     
hpj:jhp_0682 putative                                   K06180     327      467     0.285      298     
tel:tll1538 ribosomal large subunit pseudouridine synth K06180     308      466     0.285      295     
ypk:y0912 suppressor of ftsH mutation                   K06180     325      465     0.300      307     
ype:YPO3277 ribosomal large subunit pseudouridine synth K06180     325      465     0.300      307     
eam:EAMY_0833 ribosomal large subunit pseudouridine syn K06180     325      463     0.306      307     
vvu:VV1_3016 Ribosomal large subunit pseudouridine synt K06179     315      461     0.312      308     
hpy:HP_0745 conserved hypothetical protein              K06180     327      459     0.285      298     
smar:SM39_0184 23S rRNA pseudouridine synthase          K06180     325      456     0.296      307     
ret:RHE_CH03341 pseudouridylate synthase, ribosomal lar K06180     354      456     0.296      324     
pae:PA4544 pseudouridine synthase                       K06180     320      456     0.310      281     
hin:HI_0176 sfhB protein (sfhB)                         K06180     324      454     0.284      306     
rru:Rru_A1111 ribosomal large subunit pseudouridine syn K06180     343      452     0.304      299     
eba:ebA4725 ribosomal large subunit pseudouridine synth K06180     306      451     0.288      295     
dvu:DVU_1024 ribosomal large subunit pseudouridine synt K06180     541      450     0.316      301     
kpn:KPN_02917 23S rRNA pseudouridine synthase           K06180     326      448     0.293      307     
seo:STM14_3263 23S rRNA pseudouridine synthase D        K06180     326      444     0.281      306     
sty:STY2851 ftsH suppressor protein SfhB                K06180     326      444     0.281      306     
stm:STM2662 pseudouridine synthase                      K06180     326      444     0.281      306     
avn:Avin_11940 Pseudouridine synthase                   K06180     336      442     0.269      309     
pti:PHATRDRAFT_15960 hypothetical protein                          325      438     0.304      299     
sma:SAVERM_6133 putative pseudouridylate synthase       K06180     314      438     0.278      302     
gsu:GSU0082 23S rRNA synthase                           K06180     322      435     0.291      313     
reh:H16_A1434 pseudouridylate synthase, 23S RNA-specifi K06180     396      433     0.274      307     
sgu:SGLAU_09410 putative RNA pseudouridine synthase     K06180     314      432     0.281      303     
sct:SCAT_1189 putative enzyme                           K06180     313      432     0.275      302     
son:SO_3579 23S rRNA pseudouridine1911/1915/1917 syntha K06180     323      431     0.292      305     
tth:TT_C0040 ribosomal large subunit pseudouridine synt K06180     300      425     0.312      288     
bxe:Bxe_A2346 ribosomal large subunit pseudouridine syn K06180     438      424     0.278      302     
bja:blr7336 ORF_ID:blr7336; pseudouridine synthase homo K06180     335      423     0.291      323     
sco:SCO2073 putative ribosomal large subunit pseudourid K06180     314      420     0.284      303     
blo:BL0123 widely conserved hypothetical protein in the K06180     320      419     0.268      302     
ppu:PP_0623 23S rRNA pseudouridine(1911,1915,1917) synt K06180     320      419     0.266      312     
rpa:TX73_001905 RluA family pseudouridine synthase      K06180     324      418     0.288      323     
sgr:SGR_5432 putative ribosomal large subunit pseudouri K06180     313      416     0.274      303     
bma:BMA1324 ribosomal large subunit pseudouridine synth K06180     395      416     0.259      305     
bps:BPSL1532 putative ribosomal large subunit pseudouri K06180     395      416     0.259      305     
cdi:DIP1583 Putative pseudouridine synthase             K06180     308      416     0.262      301     
dra:DR_1789 ribosomal large subunit pseudouridine synth K06180     338      416     0.278      295     
ksk:KSE_21100 putative ribosomal large subunit pseudour K06180     312      414     0.262      302     
xom:XOO1481 ribosomal large subunit pseudouridine synth K06180     331      412     0.256      308     
mca:MCA0972 ribosomal large subunit pseudouridine synth K06180     334      412     0.269      309     
cgl:Cgl2138 Pseudouridylate synthases, 23S RNA-specific K06180     310      410     0.271      303     
xac:XAC3217 ribosomal large subunit pseudouridine synth K06180     331      410     0.256      308     
amd:AMED_2971 ribosomal large subunit pseudouridine syn K06180     309      408     0.262      302     
enc:ECL_03926 23S rRNA pseudouridine synthase D         K06180     282      408     0.280      279     
rso:RSc1628 probable ribosomal large subunit pseudourid K06180     358      408     0.263      312     
lil:LA_0223 ribosomal large subunit pseudouridine synth K06180     312      407     0.311      302     
vvi:100852977 RNA pseudouridine synthase 2, chloroplast K06180     433      405     0.271      350     
xcc:XCC3088 ribosomal large subunit pseudouridine synth K06180     331      405     0.252      310     
rha:RHA1_ro01072 pseudouridylate synthase               K06180     302      401     0.274      303     
bmf:BAB1_1666 Prenyl group binding site (CAAX box):RNA- K06180     334      399     0.263      327     
bms:BR1651 ribosomal large subunit pseudouridine syntha K06180     347      399     0.263      327     
wol:WD_1162 ribosomal large subunit pseudouridine synth K06180     276      398     0.330      261     
bme:BMEI0377 ribosomal large subunit pseudouridine synt K06180     347      396     0.263      327     
pde:Pden_2215 ribosomal large subunit pseudouridine syn K06180     341      395     0.281      331     
gmx:100810383 RNA pseudouridine synthase 2, chloroplast K06180     450      392     0.276      359     
mlo:mlr3740 pseudouridine synthase                      K06180     329      391     0.266      323     
msm:MSMEG_3175 ribosomal large subunit pseudouridine sy K06180     309      389     0.262      302     
bpe:BP1147 ribosomal large subunit pseudouridine syntha K06180     320      389     0.271      299     
cit:102619972 RNA pseudouridine synthase 2, chloroplast K06180     421      385     0.260      346     
xfa:XF_0939 ribosomal large subunit pseudouridine synth K06180     331      384     0.267      311     
tpa:TP_0339 conserved hypothetical protein              K06180     331      381     0.300      310     
rcu:8262627 RNA pseudouridine synthase 2, chloroplastic K06180     417      378     0.280      347     
sly:101246422 RNA pseudouridine synthase 2, chloroplast K06180     436      377     0.275      360     
cal:CAALFM_C501940WA bifunctional DRAP deaminase/tRNA p K14655     589      375     0.286      241     
mtr:11427408 RNA pseudouridine synthase 2, chloroplasti K06180     456      374     0.266      357     
rsp:RSP_2409 ribosomal large subunit pseudouridine synt K06180     349      374     0.267      326     
tde:TDE_1082 ribosomal large subunit pseudouridine synt K06180     345      371     0.314      334     
mtu:Rv1540 RNA pseudouridine synthase                   K06180     308      369     0.259      301     
mtc:MT1592 pseudouridine synthase, RluD-related protein K06180     308      369     0.259      301     
mab:MAB_2699c Probable pseudouridine synthase RluD      K06180     305      366     0.252      301     
csv:101213921 RNA pseudouridine synthase 2, chloroplast K06180     446      365     0.276      351     
ath:AT1G76050 Pseudouridine synthase family protein     K06180     430      364     0.260      350     
osa:4342081 rNA pseudouridine synthase 2, chloroplastic K06180     445      363     0.273      359     
kla:KLLA0_F14553g uncharacterized protein               K15453     377      357     0.320      231     
sce:YOL066C bifunctional DRAP deaminase/tRNA pseudourid K14655     591      354     0.277      242     
ddi:DDB_G0281097 pseudouridine synthase family protein             578      345     0.307      264     
mle:ML1200 putative pseudouridine synthase              K06180     308      343     0.255      302     
ccr:CC_0453 ribosomal large subunit pseudouridine synth K06180     342      329     0.270      304     
zma:100272459 RNA binding protein                       K06180     419      320     0.289      277     
ame:100576531 RNA pseudouridylate synthase domain-conta            306      318     0.321      215     
mgr:MGG_08117 DRAP deaminase                            K15454     487      313     0.277      267     
bmor:101737404 pseudouridylate synthase RPUSD2 isoform             612      312     0.282      245     
dme:Dmel_CG6187 RluA pseudouridine synthase 2, isoform             547      311     0.280      243     
ola:101173104 RNA pseudouridylate synthase domain-conta            541      310     0.295      241     
ecb:100071360 RNA pseudouridylate synthase domain-conta            559      309     0.284      215     
ncr:NCU03846 DRAP deaminase                             K15454     473      308     0.280      275     
cfa:487496 RNA pseudouridylate synthase domain-containi            552      308     0.284      215     
spo:2542607 tRNA pseudouridylate synthase               K15454     394      308     0.287      240     
xla:108699403 RNA pseudouridylate synthase domain-conta            495      307     0.286      213     
xtr:100497757 RNA pseudouridylate synthase domain-conta            497      306     0.280      214     
tca:661795 uncharacterized protein C18B11.02c                      642      305     0.280      243     
aga:1279080 pseudouridylate synthase RPUSD2 isoform X1             818      305     0.280      243     
ocu:100346387 pseudouridylate synthase RPUSD2                      561      304     0.284      215     
cre:CHLRE_02g078750v5 uncharacterized protein           K06180     465      303     0.256      395     
bta:506936 pseudouridylate synthase RPUSD2                         552      303     0.281      217     
ssc:102159271 LOW QUALITY PROTEIN: RNA pseudouridylate             550      303     0.284      215     
aag:5569446 RNA pseudouridylate synthase domain-contain            723      301     0.276      243     
mdo:100031994 RNA pseudouridylate synthase domain conta            541      301     0.284      215     
fca:101086655 RNA pseudouridylate synthase domain-conta            552      300     0.279      215     
hsa:27079 RNA pseudouridine synthase domain containing             545      299     0.279      215     
fgr:FGSG_02630 hypothetical protein                     K15454     512      299     0.293      246     
cne:CND02470 conserved hypothetical protein                        518      298     0.260      250     
mmu:271842 RNA pseudouridylate synthase domain containi            553      297     0.279      215     
rno:311326 pseudouridylate synthase RPUSD2                         553      296     0.267      217     
mcc:708166 RNA pseudouridylate synthase domain-containi            484      292     0.284      218     
mdm:103454910 RNA pseudouridine synthase 7              K15454     383      290     0.290      221     
dre:565088 pseudouridylate synthase RPUSD2                         579      286     0.267      240     
gga:771031 RNA pseudouridylate synthase domain-containi            324      279     0.275      229     
tps:THAPSDRAFT_36511 predicted protein                             280      274     0.248      258     
cel:CELE_K07E8.7 Pseudouridine synthase                            432      272     0.281      242     
ani:ANIA_10936 hypothetical protein                     K15454     572      263     0.260      269     
afm:AFUA_2G16360 DRAP deaminase (Rib2)                  K15454     526      250     0.287      230     
pfa:PF3D7_0521500 ribosomal large subunit pseudouridyla            487      248     0.272      261     
vg:80515165 Bodo saltans virus; pseudouridine synthase             452      244     0.295      241     
aor:AO090102000227 pseudouridine synthase               K15454     522      239     0.239      264     
lma:LMJF_35_5110 hypothetical protein                              741      226     0.244      234     
tbr:Tb927.3.2130 hypothetical protein, conserved                   828      207     0.233      296     
mja:MJ_1026 thiamine biosynthesis protein (thiC)        K03147     438      114     0.234      184     
mba:Mbar_A0953 hypothetical protein                                172      108     0.253      178     
efa:EF2176 glycosyl transferase, group 2 family protein            252      107     0.221      231     
tko:TK0614 SSV1 integrase homolog, C-fragment                      317      106     0.234      214     
ag:AEI98659 tetracycline 7-halogenase (EC:1.14.19.49)   K14257     555      101     0.270      100     

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