GFIT result for
hhf
|
GFIT result for
hhf
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| hhf:E2K99_04215 (850 a.a.) |
-- |
K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > hse:Hsero_0870(850) | 850 | 97.8 | 5200 | 24 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hsz:ACP92_04370(850) | 850 | 97.8 | 5200 | 24 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > hrb:Hrubri_0738(850) | 850 | 97.6 | 5199 | 23 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hfr:G5S34_04260(850) | 850 | 97.4 | 5195 | 25 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hee:hmeg3_19485(863) | 867 | 85.5 | 4565 | 22 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hht:F506_07150(859) | 864 | 85.1 | 4542 | 15 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > cfu:CFU_1025(831) | 854 | 82.7 | 4363 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > glc:JQN73_04935(850) | 856 | 81.5 | 4329 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > nok:FAY22_00380(827) | 854 | 81.5 | 4283 | 27 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mms:mma_0493(826) | 852 | 80.8 | 4270 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase primary sigma factor; K03086 RNA polymerase primary sigma factor | |
| > jaj:EKL02_16165(860) | 861 | 79.7 | 4268 | 22 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cpra:CPter91_1122(745) | 746 | 89.4 | 4254 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > care:LT85_1165(752) | 751 | 88.8 | 4248 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > har:HEAR0442(800) | 795 | 82.4 | 4173 | 4 | <- | K03086 | rpoD | putative RNA polymerase sigma factor rpoD (Sigma-70); K03086 RNA polymerase primary sigma factor | |
| > actb:RHM62_18650(?) | 853 | 77.8 | 4110 | 0 | -- | - | |||
| > jah:JAB4_050230(746) | 744 | 86.7 | 4103 | 5 | <- | K03086 | rpoD | rpoD_2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jri:P9875_25445(746) | 744 | 86.4 | 4098 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jaz:YQ44_03205(746) | 744 | 86.6 | 4094 | 4 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > masz:C9I28_24605(745) | 743 | 86.5 | 4094 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jal:BZG29_24365(747) | 745 | 86.4 | 4090 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jag:GJA_890(734) | 737 | 86.8 | 4089 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jlv:G3257_25065(746) | 744 | 86.3 | 4089 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masy:DPH57_24540(744) | 743 | 86.5 | 4088 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > manc:IV454_02620(750) | 752 | 85.4 | 4087 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > und:UNDKW_1456(865) | 853 | 76.3 | 4087 | 8 | <- | K03086 | rpoD | hypothetical protein; K03086 RNA polymerase primary sigma factor | |
| > mpli:E1742_11645(754) | 763 | 84.5 | 4081 | 10 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > dug:HH213_06120(747) | 745 | 85.8 | 4080 | 6 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jas:FJQ89_13975(746) | 744 | 86.0 | 4078 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jsv:CNX70_24740(746) | 744 | 86.0 | 4073 | 6 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mum:FCL38_15805(757) | 765 | 84.6 | 4072 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mtim:DIR46_17585(753) | 751 | 85.4 | 4068 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfla:GO485_11325(752) | 746 | 85.3 | 4067 | 10 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mass:CR152_13020(738) | 751 | 85.5 | 4064 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rug:QC826_03395(733) | 732 | 87.0 | 4063 | 3 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > dzo:SR858_03060(?) | 735 | 86.4 | 4055 | 0 | -- | - | |||
| > mali:EYF70_02765(756) | 762 | 83.7 | 4054 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > upv:EJN92_03990(897) | 851 | 76.4 | 4052 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mvar:MasN3_44230(751) | 748 | 85.2 | 4051 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mnr:ACZ75_23525(746) | 746 | 85.8 | 4047 | 9 | <- | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > tct:PX653_26035(728) | 730 | 86.6 | 4047 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > meny:LSQ66_17290(?) | 744 | 85.5 | 4045 | 0 | -- | - | |||
| > mlir:LPB04_09475(?) | 747 | 84.5 | 4007 | 0 | -- | - | |||
| > masw:AM586_23910(734) | 732 | 85.1 | 3997 | 6 | <- | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > tmj:P0M04_13345(736) | 734 | 85.1 | 3993 | 0 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > upi:EJG51_007715(747) | 743 | 82.8 | 3948 | 3 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > oal:NB647_03480(827) | 855 | 70.9 | 3797 | 1 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ofo:BRW83_0800(819) | 820 | 72.8 | 3792 | 1 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ovb:NB640_03710(734) | 732 | 77.0 | 3647 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfy:HH212_12175(642) | 640 | 86.3 | 3558 | 6 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cox:E0W60_22885(847) | 850 | 65.5 | 3448 | 19 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cpau:EHF44_09980(856) | 864 | 65.9 | 3442 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rmn:TK49_14525(827) | 835 | 65.6 | 3431 | 16 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > pfib:PI93_012115(789) | 800 | 69.4 | 3429 | 18 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tcar:U0034_27330(?) | 825 | 67.2 | 3427 | 0 | -- | - | |||
| > rpj:N234_15435(850) | 852 | 64.7 | 3425 | 14 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > rme:Rmet_2606(855) | 861 | 65.7 | 3420 | 12 | <- | K03086 | rpoD | rpoD1; RNA polymerase sigma D factor (housekeeping sigma factor); K03086 RNA polymerase primary sigma factor | |
| > rsc:RCFBP_11179(873) | 875 | 64.2 | 3420 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsl:RPSI07_1208(876) | 875 | 64.0 | 3420 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > bmj:BMULJ_03703(804) | 810 | 67.9 | 3417 | 47 | <- | rpoD; RNA polymerase primary sigma factor | |||
| > bmu:Bmul_4813(804) | 810 | 67.9 | 3417 | 50 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > tvl:FAZ95_37355(?) | 826 | 67.1 | 3417 | 0 | -- | - | |||
| > cuk:KB879_25560(850) | 867 | 64.5 | 3412 | 20 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reh:H16_A2725(827) | 843 | 65.7 | 3404 | 13 | <- | K03086 | rpoD | rpoD1; DNA-directed RNA polymerase sigma subunit (RpoD); K03086 RNA polymerase primary sigma factor | |
| > rwe:KOL96_18330(830) | 839 | 65.4 | 3404 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuh:BJN34_14680(850) | 868 | 64.1 | 3402 | 16 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bte:BTH_II0621(800) | 813 | 67.5 | 3399 | 43 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsn:RSPO_c01215(873) | 875 | 64.0 | 3398 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > rsy:RSUY_12400(873) | 875 | 64.0 | 3398 | 13 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bari:NLX30_33875(805) | 811 | 67.9 | 3395 | 34 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bann:JFN94_22185(805) | 811 | 67.7 | 3394 | 30 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pnr:AT302_16095(700) | 695 | 76.1 | 3394 | 5 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppul:RO07_24500(699) | 698 | 76.6 | 3393 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpf:Rpic12D_2027(821) | 836 | 65.7 | 3393 | 9 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpi:Rpic_2420(829) | 839 | 65.4 | 3393 | 8 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bam:Bamb_3257(805) | 810 | 67.2 | 3391 | 36 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppk:U875_08055(691) | 697 | 76.3 | 3391 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppnm:LV28_05550(691) | 697 | 76.3 | 3391 | 3 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > ppno:DA70_00765(691) | 697 | 76.3 | 3391 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > prb:X636_01570(691) | 697 | 76.3 | 3391 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rnc:GO999_05790(828) | 842 | 65.2 | 3391 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpu:CDC45_11305(828) | 842 | 65.2 | 3391 | 6 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bac:BamMC406_3783(805) | 811 | 67.4 | 3389 | 30 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bch:Bcen2424_3886(805) | 811 | 67.8 | 3389 | 29 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpm:BURPS1710b_A0833(800) | 809 | 66.9 | 3387 | 89 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > baen:L3V59_34395(?) | 813 | 67.3 | 3386 | 0 | -- | - | |||
| > pspu:NA29_12205(701) | 693 | 76.3 | 3386 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsg:JK151_08480(838) | 845 | 65.8 | 3386 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rse:F504_2174(819) | 829 | 65.7 | 3385 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bvi:Bcep1808_4264(809) | 829 | 66.6 | 3383 | 39 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bur:Bcep18194_B2204(808) | 814 | 67.6 | 3380 | 31 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > burk:DM992_30230(805) | 810 | 66.9 | 3380 | 30 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcom:NTU39_17520(701) | 702 | 75.4 | 3375 | 2 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfg:AB870_02870(700) | 691 | 75.7 | 3373 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pacs:FAZ98_17775(798) | 809 | 67.2 | 3369 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pmeg:FNZ07_06525(802) | 823 | 66.7 | 3367 | 17 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pacp:FAZ97_21915(802) | 812 | 67.5 | 3366 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reu:Reut_A0888(783) | 766 | 70.6 | 3366 | 25 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pter:C2L65_28295(796) | 802 | 68.5 | 3362 | 9 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccup:BKK81_15305(744) | 749 | 71.0 | 3360 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cup:BKK80_16255(744) | 749 | 71.0 | 3360 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |