KEGG   PATHWAY: bgy00230
Entry
bgy00230                    Pathway                                
Name
Purine metabolism - Bacillus glycinifermentans
Class
Metabolism; Nucleotide metabolism
Pathway map
bgy00230  Purine metabolism
bgy00230

Module
bgy_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bgy00230]
bgy_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bgy00230]
bgy_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bgy00230]
bgy_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bgy00230]
bgy_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bgy00230]
Other DBs
GO: 0006163 0042278
Organism
Bacillus glycinifermentans [GN:bgy]
Gene
BGLY_2777  nudF; ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
BGLY_2765  deoB; Phosphopentomutase [KO:K01839] [EC:5.4.2.7]
BGLY_1024  pgcA; Alpha phosphoglucomutase PgcA [KO:K01835] [EC:5.4.2.2]
BGLY_0059  prs; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
BGLY_0724  purF; Amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
BGLY_0728  purD; Phosphoribosylamine-glycine ligase [KO:K01945] [EC:6.3.4.13]
BGLY_0726  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
BGLY_0723  purL; Phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
BGLY_0721  purS; Phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
BGLY_0722  purQ; Phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
BGLY_0725  purM; Phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
BGLY_0718  purK; phosphoribosylaminoimidazole carboxylase ATPase subunit [KO:K01589] [EC:6.3.4.18]
BGLY_0717  purE; N5-carboxyaminoimidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
BGLY_0720  purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
BGLY_0719  purB; Adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
BGLY_0727  purH; Bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
BGLY_3213  apt; Adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
BGLY_3808  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
BGLY_2764  punA; purine nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
BGLY_2536  deoD; Purine nucleoside phosphorylase DeoD-type [KO:K03784] [EC:2.4.2.1]
BGLY_1751  hypothetical protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
BGLY_0076  hprT; Hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
BGLY_0008  guaB; Inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
BGLY_2683  ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
BGLY_3301  Non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
BGLY_2605  xpt; Xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
BGLY_0711  guaA; GMP synthase [glutamine-hydrolyzing] [KO:K01951] [EC:6.3.5.2]
BGLY_1229  guaC; GMP reductase [KO:K00364] [EC:1.7.1.7]
BGLY_1410  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
BGLY_1785  gmk; Guanylate kinase [KO:K00942] [EC:2.7.4.8]
BGLY_2061  bnrdE; Ribonucleoside-diphosphate reductase nrdEB subunit alpha [KO:K00525] [EC:1.17.4.1]
BGLY_1510  nrdE1; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
BGLY_2175  nrdE2; Ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
BGLY_2176  nrdF2; Ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
BGLY_1512  nrdF1; Ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
BGLY_2063  yosP; SPBc2 prophage-derived ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
BGLY_4222  anaerobic ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
BGLY_0019  dgk; deoxyguanosine kinase [KO:K15518] [EC:2.7.1.113]
BGLY_3212  relA; GTP pyrophosphokinase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
BGLY_1273  yjbM; GTP pyrophosphokinase YjbM [KO:K07816] [EC:2.7.6.5]
BGLY_4518  ywaC; GTP-pyrophosphokinase YwaC [KO:K07816] [EC:2.7.6.5]
BGLY_4704  purA; Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
BGLY_0018  dck; Deoxyadenosine/deoxycytidine kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
BGLY_1660  adenine deaminase [KO:K01486] [EC:3.5.4.2]
BGLY_0733  yerA; metallo-dependent hydrolase [KO:K01486] [EC:3.5.4.2]
BGLY_0838  yfkN; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase protein [KO:K08693] [EC:3.1.4.16 3.1.3.6 3.1.3.5]
BGLY_2113  hypothetical protein [KO:K09769] [EC:3.1.4.16]
BGLY_0144  adk; Adenylate kinase [KO:K00939] [EC:2.7.4.3]
BGLY_1775  cysC; Adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
BGLY_1774  sat; Sulfate adenylyltransferase [KO:K00958] [EC:2.7.7.4]
BGLY_3813  allantoinase [KO:K01466] [EC:3.5.2.5]
BGLY_3046  allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
BGLY_3816  allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
BGLY_3815  pucG; aminotransferase class V [KO:K00839] [EC:2.6.1.112]
BGLY_4265  ureC2; Urease subunit alpha [KO:K01428] [EC:3.5.1.5]
BGLY_4263  urease subunit beta [KO:K01429] [EC:3.5.1.5]
BGLY_4262  ureA; Urease subunit gamma [KO:K01430] [EC:3.5.1.5]
BGLY_4251  gamma-glutamyltransferase [KO:K22602] [EC:3.5.1.126]
BGLY_4555  arcC; Carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
bgy00030  Pentose phosphate pathway
bgy00220  Arginine biosynthesis
bgy00250  Alanine, aspartate and glutamate metabolism
bgy00260  Glycine, serine and threonine metabolism
bgy00340  Histidine metabolism
bgy00630  Glyoxylate and dicarboxylate metabolism
bgy00730  Thiamine metabolism
bgy00740  Riboflavin metabolism
bgy00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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