KEGG   PATHWAY: cfir00010
Entry
cfir00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Cytobacillus firmus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
cfir00010  Glycolysis / Gluconeogenesis
cfir00010

Module
cfir_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cfir00010]
cfir_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cfir00010]
cfir_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cfir00010]
cfir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cfir00010]
Other DBs
GO: 0006096 0006094
Organism
Cytobacillus firmus [GN:cfir]
Gene
NAF01_18535  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
NAF01_21070  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
NAF01_19960  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
NAF01_23955  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
NAF01_23970  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
NAF01_21890  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
NAF01_21900  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
NAF01_19875  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
NAF01_21895  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
NAF01_18090  phosphoglycerate mutase family protein [KO:K01834] [EC:5.4.2.11]
NAF01_04610  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
NAF01_21885  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
NAF01_21880  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
NAF01_19955  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
NAF01_08305  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
NAF01_08310  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
NAF01_08315  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
NAF01_23185  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
NAF01_08320  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NAF01_10830  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NAF01_18200  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NAF01_23180  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NAF01_09605  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
NAF01_09610  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
NAF01_18560  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
NAF01_24535  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
NAF01_04855  glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
NAF01_11345  glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
NAF01_14180  glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
NAF01_03460  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
NAF01_11550  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
NAF01_12425  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NAF01_21970  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
NAF01_20125  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
NAF01_20195  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NAF01_23120  CoA-binding protein [KO:K24012] [EC:6.2.1.13]
NAF01_13360  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
NAF01_06200  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
NAF01_22835  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
NAF01_20505  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
NAF01_12980  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
NAF01_16860  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
NAF01_03120  maltose/glucose-specific PTS transporter subunit IIC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
NAF01_22815  malX; maltose/glucose-specific PTS transporter subunit IIBC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
NAF01_01755  ptsG; glucose-specific PTS transporter subunit IIBC [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
cfir00020  Citrate cycle (TCA cycle)
cfir00030  Pentose phosphate pathway
cfir00500  Starch and sucrose metabolism
cfir00620  Pyruvate metabolism
cfir00640  Propanoate metabolism
cfir00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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