KEGG   PATHWAY: dac00230
Entry
dac00230                    Pathway                                
Name
Purine metabolism - Delftia acidovorans
Class
Metabolism; Nucleotide metabolism
Pathway map
dac00230  Purine metabolism
dac00230

Module
dac_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:dac00230]
dac_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dac00230]
dac_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dac00230]
dac_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dac00230]
dac_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dac00230]
dac_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:dac00230]
dac_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:dac00230]
Other DBs
GO: 0006163 0042278
Organism
Delftia acidovorans [GN:dac]
Gene
Daci_5433  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Daci_4769  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Daci_3522  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
Daci_5372  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Daci_5252  phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
Daci_4851  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
Daci_2185  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Daci_0989  phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
Daci_0990  phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
Daci_0999  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Daci_0852  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Daci_1564  phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Daci_6052  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Daci_5704  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
Daci_5725  5'-Nucleotidase domain protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Daci_5029  stationary-phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Daci_4775  protein of unknown function DUF1255 [KO:K09913] [EC:2.4.2.1 2.4.2.2]
Daci_3598  protein of unknown function DUF152 [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
Daci_3008  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
Daci_5023  Nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Daci_2032  non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
Daci_5910  xanthine dehydrogenase, small subunit [KO:K13481] [EC:1.17.1.4]
Daci_5909  xanthine dehydrogenase, molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
Daci_3816  aldehyde oxidase and xanthine dehydrogenase molybdopterin binding [KO:K11177] [EC:1.17.1.4]
Daci_3817  molybdopterin dehydrogenase FAD-binding [KO:K11178] [EC:1.17.1.4]
Daci_3818  (2Fe-2S)-binding domain protein [KO:K13483]
Daci_3715  glutamine amidotransferase class-I [KO:K01951] [EC:6.3.5.2]
Daci_3013  GMP synthase, large subunit [KO:K01951] [EC:6.3.5.2]
Daci_3185  glutamine amidotransferase class-I [KO:K01951] [EC:6.3.5.2]
Daci_5332  guanosine monophosphate reductase [KO:K00364] [EC:1.7.1.7]
Daci_2513  guanine deaminase [KO:K01487] [EC:3.5.4.3]
Daci_2147  guanine deaminase [KO:K01487] [EC:3.5.4.3]
Daci_2028  Guanylate kinase [KO:K00942] [EC:2.7.4.8]
Daci_1501  ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
Daci_1115  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
Daci_1500  Ribonucleoside-diphosphate reductase [KO:K00526] [EC:1.17.4.1]
Daci_5573  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
Daci_2026  (p)ppGpp synthetase I, SpoT/RelA [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Daci_4919  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Daci_4921  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Daci_2856  (p)ppGpp synthetase I, SpoT/RelA [KO:K00951] [EC:2.7.6.5]
Daci_5738  adenylate/guanylate cyclase [KO:K01768] [EC:4.6.1.1]
Daci_5046  adenylate cyclase [KO:K01768] [EC:4.6.1.1]
Daci_5009  Adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
Daci_1498  PfkB domain protein [KO:K00856] [EC:2.7.1.20]
Daci_1201  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
Daci_2144  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
Daci_1899  5'-Nucleotidase domain protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
Daci_3567  Nucleoside-triphosphate--adenylate kinase [KO:K00939] [EC:2.7.4.3]
Daci_3120  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
Daci_2156  bis(5'nucleosyl)-tetraphosphatase, ApaH [KO:K01525] [EC:3.6.1.41]
Daci_3191  Adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
Daci_4656  sulfate adenylyltransferase, large subunit [KO:K00956] [EC:2.7.7.4]
Daci_4655  Sulfate adenylyltransferase [KO:K00957] [EC:2.7.7.4]
Daci_0532  FAD dependent oxidoreductase [KO:K22879] [EC:1.14.13.113]
Daci_2121  hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
Daci_2110  urate catabolism protein [KO:K16842] [EC:3.5.2.5]
Daci_5077  Ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
Daci_1182  urease, alpha subunit [KO:K01428] [EC:3.5.1.5]
Daci_1183  urease, beta subunit [KO:K01429] [EC:3.5.1.5]
Daci_1185  urease, gamma subunit [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
dac00030  Pentose phosphate pathway
dac00220  Arginine biosynthesis
dac00250  Alanine, aspartate and glutamate metabolism
dac00260  Glycine, serine and threonine metabolism
dac00340  Histidine metabolism
dac00630  Glyoxylate and dicarboxylate metabolism
dac00730  Thiamine metabolism
dac00740  Riboflavin metabolism
dac00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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