KEGG   PATHWAY: gfs03040
Entry
gfs03040                    Pathway                                
Name
Spliceosome - Glossina fuscipes (tsetse fly)
Description
After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.
Class
Genetic Information Processing; Transcription
Pathway map
gfs03040  Spliceosome
gfs03040

Other DBs
GO: 0005681
PDB: 5O9Z 5Z56 6FF7 8I0W
Organism
Glossina fuscipes (tsetse fly) [GN:gfs]
Gene
119631244  [KO:K12835] [EC:5.6.2.7]
119631265  [KO:K12843]
119631337  [KO:K12833]
119631481  [KO:K12733] [EC:5.2.1.8]
119631894  [KO:K11087]
119631940  [KO:K12844]
119632042  [KO:K13175]
119632053  [KO:K12855]
119632241  [KO:K12621]
119632518  [KO:K03283]
119632635  [KO:K12662]
119632735  [KO:K14280]
119632738  [KO:K14280]
119632739  [KO:K14280]
119632797  [KO:K11984]
119633138  [KO:K12862]
119633143  [KO:K12812] [EC:5.6.2.7]
119633152  [KO:K12891]
119633164  [KO:K12854] [EC:5.6.2.6]
119633299  [KO:K09564] [EC:5.2.1.8]
119633362  [KO:K12626]
119633411  [KO:K12821]
119633412  [KO:K12829]
119633423  [KO:K12823] [EC:5.6.2.7]
119633640  [KO:K12859]
119633792  [KO:K12845]
119633889  [KO:K12813] [EC:5.6.2.6]
119633930  [KO:K12834]
119633939  [KO:K12875]
119633944  [KO:K12896]
119634271  [KO:K14278]
119634275  [KO:K14280]
119634276  [KO:K14280]
119634447  [KO:K12893]
119634463  [KO:K12823] [EC:5.6.2.7]
119634685  [KO:K13025] [EC:5.6.2.7]
119634767  [KO:K12741]
119634768  [KO:K12816]
119634850  [KO:K12839]
119634901  [KO:K12870]
119634965  [KO:K14323]
119634989  [KO:K12741]
119635049  [KO:K12871]
119635138  [KO:K12622]
119635176  [KO:K12872]
119635220  [KO:K14276]
119635221  [KO:K14276]
119635223  [KO:K14276]
119635324  [KO:K12858] [EC:5.6.2.7]
119635356  [KO:K12836]
119635366  [KO:K28450]
119635556  [KO:K14277]
119635557  [KO:K14277]
119635612  [KO:K12838]
119635632  [KO:K13108]
119635641  [KO:K12856]
119635725  [KO:K12820] [EC:5.6.2.6]
119635896  [KO:K11092]
119636111  [KO:K14280]
119636128  [KO:K12868]
119636156  [KO:K12849]
119636318  [KO:K12873]
119636561  [KO:K12627]
119636644  [KO:K12846]
119636646  [KO:K12867]
119636727  [KO:K12625]
119636776  [KO:K12831]
119636787  [KO:K12837]
119636795  [KO:K12837]
119636821  [KO:K12877]
119636986  [KO:K10599] [EC:2.3.2.27]
119637075  [KO:K12847]
119637092  [KO:K12869]
119637097  [KO:K12869]
119637168  [KO:K12850]
119637295  [KO:K12866]
119637386  [KO:K12828]
119637580  [KO:K12882]
119637640  [KO:K12812] [EC:5.6.2.7]
119637733  [KO:K14280]
119637835  [KO:K12865]
119637858  [KO:K12826]
119637942  [KO:K12848]
119638015  [KO:K12823] [EC:5.6.2.7]
119638029  [KO:K12878]
119638052  [KO:K12880]
119638162  [KO:K14276]
119638163  [KO:K14279]
119638164  [KO:K14279]
119638165  [KO:K14276]
119638166  [KO:K14276]
119638167  [KO:K14276]
119638168  [KO:K14276]
119638207  [KO:K28527]
119638451  [KO:K12852]
119638641  [KO:K12886]
119638662  [KO:K09567] [EC:5.2.1.8]
119638755  [KO:K12818] [EC:5.6.2.6]
119638907  [KO:K12861]
119639086  [KO:K14277]
119639197  [KO:K12827]
119639237  [KO:K13106]
119639305  [KO:K12824]
119639414  [KO:K11096]
119639518  [KO:K12624]
119639572  [KO:K11095]
119639668  [KO:K14280]
119639669  [KO:K14280]
119639734  [KO:K12838]
119639748  [KO:K12897]
119639889  [KO:K12864]
119640001  [KO:K12890]
119640116  [KO:K13095]
119640182  [KO:K14277]
119640184  [KO:K14277]
119640185  [KO:K14277]
119640218  [KO:K13176]
119640235  [KO:K12857]
119640288  [KO:K12625]
119640291  [KO:K11095]
119640371  [KO:K12879]
119640397  [KO:K11093]
119640666  [KO:K14277]
119641008  [KO:K12863]
119641132  [KO:K14279]
119641250  [KO:K12876]
119641274  [KO:K12832]
119641315  [KO:K13174]
119641396  [KO:K12811] [EC:5.6.2.7]
119641414  [KO:K11094]
119641429  [KO:K14279]
119641452  [KO:K12874]
119641497  [KO:K12883]
119641645  [KO:K12842]
119641733  [KO:K12825]
119641901  [KO:K12840]
119641924  [KO:K03283]
119641929  [KO:K12893]
119641967  [KO:K14280]
119641976  [KO:K03283]
119641999  [KO:K03283]
119642040  [KO:K12817]
119642057  [KO:K03283]
119642058  [KO:K03283]
119642379  [KO:K11086]
119642403  [KO:K12623]
119642462  [KO:K14279]
119642646  [KO:K12819]
119642677  [KO:K12881]
119642696  [KO:K13101]
119642897  [KO:K14280]
119643053  [KO:K14279]
119643078  [KO:K14279]
119643137  [KO:K14279]
119643165  [KO:K14279]
119643187  [KO:K09567] [EC:5.2.1.8]
119643192  [KO:K12626]
119643224  [KO:K14279]
119643241  [KO:K14279]
119643266  [KO:K14279]
119643428  [KO:K14280]
119643433  [KO:K14279]
119643503  [KO:K11088]
119643802  [KO:K14280]
119643936  [KO:K14279]
119643960  [KO:K12824]
119643983  [KO:K12824]
119643985  [KO:K06063]
119643987  [KO:K06063]
119644054  [KO:K06063]
119644377  [KO:K11097]
119644379  [KO:K11097]
119644474  [KO:K14280]
119644476  [KO:K14280]
119644635  [KO:K11098]
119644646  [KO:K11099]
119644682  [KO:K13098]
119644857  [KO:K14278]
119644858  [KO:K14279]
119644859  [KO:K14280]
119644860  [KO:K14280]
119644972  [KO:K12815] [EC:5.6.2.6]
119645027  [KO:K12860]
119645145  [KO:K12841]
119645170  [KO:K12830]
119645335  [KO:K12823] [EC:5.6.2.7]
Reference
  Authors
Wahl MC, Will CL, Luhrmann R
  Title
The spliceosome: design principles of a dynamic RNP machine.
  Journal
Cell 136:701-18 (2009)
DOI:10.1016/j.cell.2009.02.009
Reference
  Authors
Morris DP, Greenleaf AL
  Title
The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.
  Journal
J Biol Chem 275:39935-43 (2000)
DOI:10.1074/jbc.M004118200
Reference
  Authors
Chen YI, Moore RE, Ge HY, Young MK, Lee TD, Stevens SW
  Title
Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors.
  Journal
Nucleic Acids Res 35:3928-44 (2007)
DOI:10.1093/nar/gkm347
Reference
  Authors
Ritchie DB, Schellenberg MJ, MacMillan AM
  Title
Spliceosome structure: piece by piece.
  Journal
Biochim Biophys Acta 1789:624-33 (2009)
DOI:10.1016/j.bbagrm.2009.08.010
Reference
  Authors
Bertram K, Agafonov DE, Dybkov O, Haselbach D, Leelaram MN, Will CL, Urlaub H, Kastner B, Luhrmann R, Stark H
  Title
Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation.
  Journal
Cell 170:701-713.e11 (2017)
DOI:10.1016/j.cell.2017.07.011
Reference
  Authors
Zhang X, Yan C, Zhan X, Li L, Lei J, Shi Y
  Title
Structure of the human activated spliceosome in three conformational states.
  Journal
Cell Res 28:307-322 (2018)
DOI:10.1038/cr.2018.14
Reference
  Authors
Haselbach D, Komarov I, Agafonov DE, Hartmuth K, Graf B, Dybkov O, Urlaub H, Kastner B, Luhrmann R, Stark H
  Title
Structure and Conformational Dynamics of the Human Spliceosomal B(act) Complex.
  Journal
Cell 172:454-464.e11 (2018)
DOI:10.1016/j.cell.2018.01.010
Reference
  Authors
Zhan X, Lu Y, Shi Y
  Title
Molecular basis for the activation of human spliceosome.
  Journal
Nat Commun 15:6348 (2024)
DOI:10.1038/s41467-024-50785-0
KO pathway
ko03040   

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