KEGG   PATHWAY: goy00230
Entry
goy00230                    Pathway                                
Name
Purine metabolism - Gluconobacter oxydans DSM 3504
Class
Metabolism; Nucleotide metabolism
Pathway map
goy00230  Purine metabolism
goy00230

Module
goy_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:goy00230]
goy_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:goy00230]
goy_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:goy00230]
goy_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:goy00230]
goy_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:goy00230]
Other DBs
GO: 0006163 0042278
Organism
Gluconobacter oxydans DSM 3504 [GN:goy]
Gene
GLS_c09270  hypothetical protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
GLS_c22810  hypothetical protein [KO:K18447] [EC:3.6.1.21]
GLS_c05630  celB; phosphoglucomutase CelB [KO:K01835] [EC:5.4.2.2]
GLS_c10430  prs; ribose-phosphate pyrophosphokinase Prs [KO:K00948] [EC:2.7.6.1]
GLS_c17580  purF; amidophosphoribosyltransferase PurF [KO:K00764] [EC:2.4.2.14]
GLS_c18440  purD; phosphoribosylamine--glycine ligase PurD [KO:K01945] [EC:6.3.4.13]
GLS_c20470  phosphoribosylglycinamide formyltransferase protein [KO:K11175] [EC:2.1.2.2]
GLS_c24470  purL; phosphoribosylformylglycinamidine synthase 2 [KO:K23269] [EC:6.3.5.3]
GLS_c24440  purS; phosphoribosyformylglycinamidine synthase PurS [KO:K23264] [EC:6.3.5.3]
GLS_c24460  purQ; phosphoribosylformylglycinamidine synthase 1 [KO:K23265] [EC:6.3.5.3 3.5.1.2]
GLS_c20480  purM; phosphoribosylformylglycinamidine cyclo-ligase PurM [KO:K01933] [EC:6.3.3.1]
GLS_c24930  purK; phosphoribosylaminoimidazole carboxylase ATPase subunit PurK [KO:K01589] [EC:6.3.4.18]
GLS_c24940  purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE [KO:K01588] [EC:5.4.99.18]
GLS_c24430  purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC [KO:K01923] [EC:6.3.2.6]
GLS_c24420  purB; adenylosuccinate lyase PurB [KO:K01756] [EC:4.3.2.2]
GLS_c04460  purH; bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
GLS_c09190  apt; adenine phosphoribosyltransferase Apt [KO:K00759] [EC:2.4.2.7]
GLS_c12050  putative inner membrane protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
GLS_c24090  guaB; inosine-5'-monophosphate dehydrogenase GuaB [KO:K00088] [EC:1.1.1.205]
GLS_c20450  ndk; nucleoside diphosphate kinase Ndk [KO:K00940] [EC:2.7.4.6]
GLS_c13650  nucleoside-triphosphatase [KO:K01519] [EC:3.6.1.66]
GLS_c02000  gpt; putative xanthine phosphoribosyltransferase Gpt [KO:K00769] [EC:2.4.2.22]
GLS_c07430  xdh2; xanthine dehydrogenase/oxidase Xdh [KO:K13481] [EC:1.17.1.4]
GLS_c07420  xdh1; xanthine dehydrogenase/oxidase Xdh [KO:K13482] [EC:1.17.1.4]
GLS_c16360  yagR; putative xanthine dehydrogenase YagR [KO:K11177] [EC:1.17.1.4]
GLS_c16370  yagS; putative xanthine dehydrogenase YagS [KO:K11178] [EC:1.17.1.4]
GLS_c16380  yagT; putative xanthine dehydrogenase YagT [KO:K13483]
GLS_c20640  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
GLS_c09800  guaD; guanine deaminase GuaD [KO:K01487] [EC:3.5.4.3]
GLS_c10660  gmk; guanylate kinase Gmk [KO:K00942] [EC:2.7.4.8]
GLS_c21060  ribonucleoside-diphosphate reductase large subunit [KO:K00525] [EC:1.17.4.1]
GLS_c11830  nrdJ; vitamin B12-dependent ribonucleotide reductase NrdJ [KO:K00525] [EC:1.17.4.1]
GLS_c21070  ribonucleoside-diphosphate reductase beta chain [KO:K00526] [EC:1.17.4.1]
GLS_c18720  deoxyguanosinetriphosphate triphosphohydrolase-like protein [KO:K01129] [EC:3.1.5.1]
GLS_c19260  rsh; GTP pyrophosphokinase Rsh [KO:K01139] [EC:2.7.6.5 3.1.7.2]
GLS_c20510  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
GLS_c24070  putative exopolyphosphatase/guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase Ppx/GppA [KO:K01524] [EC:3.6.1.11 3.6.1.40]
GLS_c21350  putative adenylate cyclase [KO:K01768] [EC:4.6.1.1]
GLS_c15640  purA; adenylosuccinate synthase PurA [KO:K01939] [EC:6.3.4.4]
GLS_c15530  putative adenosine deaminase [KO:K01488] [EC:3.5.4.4]
GLS_c18360  ade; adenine deaminase Ade [KO:K01486] [EC:3.5.4.2]
GLS_c02480  ymdB; metallophosphoesterase YmdB [KO:K09769] [EC:3.1.4.16]
GLS_c03790  adk; adenylate kinase Adk [KO:K00939] [EC:2.7.4.3]
GLS_c15590  mazG; protein MazG [KO:K04765] [EC:3.6.1.9]
GLS_c10050  cysNC; bifunctional enzyme CysN/CysC [KO:K00955] [EC:2.7.7.4 2.7.1.25]
GLS_c10060  cysD; sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
GLS_c09860  putative oxidoreductase [KO:K22879] [EC:1.14.13.113]
GLS_c09830  5-hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
GLS_c09840  OHCU decarboxylase [KO:K13485] [EC:4.1.1.97]
GLS_c09850  putative urate catabolism protein [KO:K16842] [EC:3.5.2.5]
GLS_c13830  amaB; N-carbamoyl-L-amino acid hydrolase AmaB [KO:K02083] [EC:3.5.3.9]
GLS_c13840  serine-pyruvate aminotransferase [KO:K00839] [EC:2.6.1.112]
GLS_c16190  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
GLS_c16180  ureB; urease subunit beta [KO:K01429] [EC:3.5.1.5]
GLS_c16170  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
GLS_c13810  ywrD; putative gamma-glutamyltransferase YwrD [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
goy00030  Pentose phosphate pathway
goy00220  Arginine biosynthesis
goy00250  Alanine, aspartate and glutamate metabolism
goy00260  Glycine, serine and threonine metabolism
goy00340  Histidine metabolism
goy00630  Glyoxylate and dicarboxylate metabolism
goy00730  Thiamine metabolism
goy00740  Riboflavin metabolism
goy00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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