KEGG   PATHWAY: hrt00970
Entry
hrt00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Hirundo rustica (Barn swallow)
Class
Genetic Information Processing; Translation
Pathway map
hrt00970  Aminoacyl-tRNA biosynthesis
hrt00970

Organism
Hirundo rustica (Barn swallow) [GN:hrt]
Gene
120747825  SARS2; serine--tRNA ligase, mitochondrial [KO:K01875] [EC:6.1.1.11]
120747878  MARS1; methionine--tRNA ligase, cytoplasmic isoform X1 [KO:K01874] [EC:6.1.1.10]
120749620  NARS2; probable asparagine--tRNA ligase, mitochondrial isoform X1 [KO:K01893] [EC:6.1.1.22]
120749667  WARS2; tryptophan--tRNA ligase, mitochondrial [KO:K01867] [EC:6.1.1.2]
120749694  CARS2; probable cysteine--tRNA ligase, mitochondrial [KO:K01883] [EC:6.1.1.16]
120749748  EPRS1; bifunctional glutamate/proline--tRNA ligase isoform X1 [KO:K14163] [EC:6.1.1.17 6.1.1.15]
120749780  AARS2; alanine--tRNA ligase, mitochondrial [KO:K01872] [EC:6.1.1.7]
120750805  QRSL1; glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial [KO:K02433] [EC:6.3.5.6 6.3.5.7]
120751229  IARS2; isoleucine--tRNA ligase, mitochondrial [KO:K01870] [EC:6.1.1.5]
120751286  RARS2; probable arginine--tRNA ligase, mitochondrial isoform X1 [KO:K01887] [EC:6.1.1.19]
120751666  FARS2; phenylalanine--tRNA ligase, mitochondrial isoform X1 [KO:K01889] [EC:6.1.1.20]
120752405  YARS2; tyrosine--tRNA ligase, mitochondrial [KO:K01866] [EC:6.1.1.1]
120753236  SEPSECS; O-phosphoseryl-tRNA(Sec) selenium transferase isoform X1 [KO:K03341] [EC:2.9.1.2]
120753302  GATB; glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
120754131  CARS1; cysteine--tRNA ligase, cytoplasmic isoform X1 [KO:K01883] [EC:6.1.1.16]
120754607  WARS1; tryptophan--tRNA ligase, cytoplasmic [KO:K01867] [EC:6.1.1.2]
120755175  GARS1; glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
120755242  DARS1; aspartate--tRNA ligase, cytoplasmic [KO:K22503] [EC:6.1.1.12]
120755916  PSTK; L-seryl-tRNA(Sec) kinase [KO:K10837] [EC:2.7.1.164]
120756308  DARS2; aspartate--tRNA ligase, mitochondrial isoform X1 [KO:K01876] [EC:6.1.1.12]
120756516  PARS2; probable proline--tRNA ligase, mitochondrial [KO:K01881] [EC:6.1.1.15]
120757172  FARSB; phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
120757575  KARS1; lysine--tRNA ligase isoform X1 [KO:K04567] [EC:6.1.1.6]
120757619  AARS1; alanine--tRNA ligase, cytoplasmic [KO:K01872] [EC:6.1.1.7]
120758121  IARS1; isoleucine--tRNA ligase, cytoplasmic isoform X1 [KO:K01870] [EC:6.1.1.5]
120758370  QARS1; glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
120758696  MTFMT; methionyl-tRNA formyltransferase, mitochondrial isoform X1 [KO:K00604] [EC:2.1.2.9]
120758833  [KO:K01868] [EC:6.1.1.3]
120759028  RARS1; arginine--tRNA ligase, cytoplasmic isoform X1 [KO:K01887] [EC:6.1.1.19]
120759127  [KO:K01892] [EC:6.1.1.21]
120759128  HARS1; histidine--tRNA ligase, cytoplasmic [KO:K01892] [EC:6.1.1.21]
120759144  LARS1; leucine--tRNA ligase, cytoplasmic isoform X1 [KO:K01869] [EC:6.1.1.4]
120759451  EARS2; probable glutamate--tRNA ligase, mitochondrial isoform X1 [KO:K01885] [EC:6.1.1.17]
120759929  LARS2; leucine--tRNA ligase, mitochondrial isoform X1 [KO:K01869] [EC:6.1.1.4]
120760726  GATC; glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X1 [KO:K02435] [EC:6.3.5.6 6.3.5.7]
120761972  MARS2; LOW QUALITY PROTEIN: methionine--tRNA ligase, mitochondrial [KO:K01874] [EC:6.1.1.10]
120762918  SARS1; LOW QUALITY PROTEIN: serine--tRNA ligase, cytoplasmic [KO:K01875] [EC:6.1.1.11]
120763023  YARS1; tyrosine--tRNA ligase, cytoplasmic [KO:K01866] [EC:6.1.1.1]
120764211  TARS2; threonine--tRNA ligase, mitochondrial [KO:K01868] [EC:6.1.1.3]
120764709  FARSA; phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
120765416  TARS1; threonine--tRNA ligase 1, cytoplasmic isoform X1 [KO:K01868] [EC:6.1.1.3]
120765671  NARS1; asparagine--tRNA ligase, cytoplasmic [KO:K01893] [EC:6.1.1.22]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
hrt00250  Alanine, aspartate and glutamate metabolism
hrt00260  Glycine, serine and threonine metabolism
hrt00270  Cysteine and methionine metabolism
hrt00290  Valine, leucine and isoleucine biosynthesis
hrt00330  Arginine and proline metabolism
hrt00340  Histidine metabolism
hrt00380  Tryptophan metabolism
hrt00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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