KEGG   PATHWAY: msg00984
Entry
msg00984                    Pathway                                
Name
Steroid degradation - Mycolicibacterium smegmatis MC2 155
Class
Metabolism; Xenobiotics biodegradation and metabolism
Pathway map
msg00984  Steroid degradation
msg00984

Other DBs
GO: 0006707
Organism
Mycolicibacterium smegmatis MC2 155 [GN:msg]
Gene
MSMEI_1565  choD; Cholesterol oxidase ChoD [KO:K03333] [EC:1.1.3.6]
MSMEI_2032  [KO:K16047] [EC:1.14.14.12]
MSMEI_2149  [KO:K28224]
MSMEI_2177  fadD19; Putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase [KO:K18688] [EC:6.2.1.42]
MSMEI_2188  [KO:K18688] [EC:6.2.1.42]
MSMEI_2793  [KO:K05898] [EC:1.3.99.4]
MSMEI_2795  [KO:K05898] [EC:1.3.99.4]
MSMEI_2796  [KO:K15982] [EC:1.14.15.30]
MSMEI_2799  [KO:K16051] [EC:1.3.99.5]
MSMEI_2817  bphC; Glyoxalase/bleomycin resistance protein/dioxygenase [KO:K16049] [EC:1.13.11.25]
MSMEI_2818  [KO:K16047] [EC:1.14.14.12]
MSMEI_2819  hmp; Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region [KO:K15983] [EC:1.14.15.30]
MSMEI_2937  fadA6; Acetyl-CoA acetyltransferase [KO:K00632] [EC:2.3.1.16]
MSMEI_3443  cyp125; Cytochrome P450 CYP125 [KO:K15981] [EC:1.14.15.29]
MSMEI_3600  [KO:K18688] [EC:6.2.1.42]
MSMEI_3890  [KO:K01796] [EC:5.1.99.4]
MSMEI_4012  [KO:K01796] [EC:5.1.99.4]
MSMEI_4650  [KO:K18687] [EC:6.2.1.41]
MSMEI_4709  [KO:K00632] [EC:2.3.1.16]
MSMEI_4722  [KO:K28232]
MSMEI_4739  [KO:K05898] [EC:1.3.99.4]
MSMEI_5050  [KO:K01796] [EC:5.1.99.4]
MSMEI_5064  [KO:K00632] [EC:2.3.1.16]
MSMEI_5091  [KO:K16045] [EC:1.1.1.145 5.3.3.1]
MSMEI_5120  [KO:K01822] [EC:5.3.3.1]
MSMEI_5582  far; Fatty-acid-CoA racemase Far [KO:K01796] [EC:5.1.99.4]
MSMEI_5695  cyp125; Cytochrome P450 CYP125 [KO:K15981] [EC:1.14.15.29]
MSMEI_5708  [KO:K01822] [EC:5.3.3.1]
MSMEI_5727  echA13; putative enoyl-CoA hydratase echA13 [KO:K28232]
MSMEI_5743  [KO:K28219]
MSMEI_5746  fadE26; Acyl-CoA dehydrogenase FadE26 [KO:K22818] [EC:1.3.99.-]
MSMEI_5747  fadE27; Acyl-CoA dehydrogenase FadE27 [KO:K22819] [EC:1.3.99.-]
MSMEI_5754  fadD19; Fatty-acid-CoA ligase FadD18 [KO:K18688] [EC:6.2.1.42]
MSMEI_5758  cyp142; Putative cytochrome p450 monooxygenase 142 CYP142 [KO:K16046] [EC:1.14.15.28]
MSMEI_5766  [KO:K15982] [EC:1.14.15.30]
MSMEI_5781  [KO:K05898] [EC:1.3.99.4]
MSMEI_5782  [KO:K28218]
MSMEI_5829  ltp2; Lipid transfer protein or keto acyl-CoA thiolase Ltp2 [KO:K25623]
MSMEI_5830  [KO:K25622]
MSMEI_5831  [KO:K25621]
MSMEI_5832  [KO:K22822] [EC:1.3.99.-]
MSMEI_5833  [KO:K22821] [EC:1.3.99.-]
MSMEI_5834  cyp125; Cytochrome P450 CYP125 [KO:K15981] [EC:1.14.15.29]
MSMEI_5835  fadA5; Acetyl-CoA acetyltransferase FadA5 [KO:K00632] [EC:2.3.1.16]
MSMEI_5838  [KO:K28225]
MSMEI_5840  echA20; Enoyl-CoA hydratase/isomerase [KO:K28227]
MSMEI_5841  [KO:K28228]
MSMEI_5842  [KO:K28229]
MSMEI_5843  [KO:K28226]
MSMEI_5848  fadA6; putative acetyl-COA acetyltransferase Fada6 (acetoacetyl-COA thiolase) [KO:K00632] [EC:2.3.1.16]
MSMEI_5851  [KO:K28220]
MSMEI_5853  fadD3; AMP-dependent synthetase and ligase [KO:K18687] [EC:6.2.1.41]
MSMEI_5854  fadE31; Acyl-CoA dehydrogenase [KO:K28230]
MSMEI_5855  fadE32; Acyl-CoA dehydrogenase FadE32 [KO:K28231]
MSMEI_5856  fadE33; Acyl-CoA dehydrogenase FadE33 [KO:K28221]
MSMEI_5874  [KO:K16048] [EC:1.5.1.-]
MSMEI_5875  bphC; Glyoxalase/bleomycin resistance protein/dioxygenase [KO:K16049] [EC:1.13.11.25]
MSMEI_5876  bphD; Alpha/beta hydrolase fold protein [KO:K16050] [EC:3.7.1.17]
MSMEI_5877  [KO:K16047] [EC:1.14.14.12]
MSMEI_5878  hmp; Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region [KO:K15983] [EC:1.14.15.30]
MSMEI_5880  fadE34; Acyl-CoA dehydrogenase FadE34 [KO:K22820] [EC:1.3.99.-]
MSMEI_6613  [KO:K01822] [EC:5.3.3.1]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00187  Cholesterol
C00280  Androstenedione
C00479  Propanal
C00535  Testosterone
C00599  Cholest-4-en-3-one
C00674  5alpha-Androstane-3,17-dione
C01227  Dehydroepiandrosterone
C04793  3,4-Dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
C04844  3-Hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1(10),2-dien-4-oate
C06762  4-Hydroxy-2-oxohexanoic acid
C07635  Epiandrosterone
C11354  2-Hydroxy-cis-hex-2,4-dienoate
C14909  9alpha-Hydroxyandrosta-1,4-diene-3,17-dione
C19944  3-Hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
C20144  Androsta-1,4-diene-3,17-dione
C20199  3-[(3aS,4S,7aS)-7a-Methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
C20252  5-Androstene-3,17-dione
C20838  3-[(3aS,4S,7aS)-7a-Methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
C20839  (25R)-3-Oxocholest-4-en-26-oate
C20840  (25S)-3-Oxocholest-4-en-26-oyl-CoA
C21076  Delta4-Dafachronic acid
C21906  3-Oxochol-4-en-24-oyl-CoA
C23003  3-[(3aS,4S,5R,7aS)-5-Hydroxy-7a-methyl-1-oxooctahydro-1H-inden-4-yl]propanoyl-CoA
C23004  (2E)-3-[(3aS,4S,5R,7aS)-5-Hydroxy-7a-methyl-1-oxooctahydro-1H-inden-4-yl]prop-2-enoyl-CoA
C23005  3-[(3aS,4S,5R,7aS)-5-Hydroxy-7a-methyl-1-oxooctahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
C23006  3-[(3aS,4S,5R,7aS)-5-Hydroxy-7a-methyl-1-oxooctahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
C23007  (3aS,4S,5R,7aS)-5-Hydroxy-7a-methyl-1-oxooctahydro-1H-indene-4-carboxyl-CoA
C23009  (7aS)-7a-Methyl-1,5-dioxo-2,3,5,6,7,7a-hexahydro-1H-indene-4-carboxyl-CoA
C23010  3-Oxocholest-4,24-dien-26-oyl-CoA
C23011  (25R)-3-Oxocholest-4-en-26-oyl-CoA
C23012  24-Hydroxy-3-oxocholest-4-en-26-oyl-CoA
C23013  3,24-Dioxocholest-4-en-26-oyl-CoA
C23014  3-Oxochol-4,22-dien-24-oyl-CoA
C23015  (22S)-Hydroxy-3-oxochol-4-en-24-oyl-CoA
C23016  3,22-Dioxochol-4-en-24-oyl-CoA
C23017  3-Oxopregnene-20-carboxyl-CoA
C23018  3-Oxo-4,17-pregnadiene-20-carboxyl-CoA
C23019  17-Hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA
C23020  (3R)-2-(2-carboxyethyl)-3-methyl-6-oxocyclohex-1-ene-1-carboxyl-CoA
C23021  9-Carboxy-6-methyl-3,7-dioxononanoyl-CoA
C23022  7-Carboxy-4-methyl-5-oxoheptanoyl-CoA
C23023  (2E)-7-Carboxy-4-methyl-5-oxohept-2-enoyl-CoA
C23024  7-Carboxy-3-hydroxy-4-methyl-5-oxoheptanoyl-CoA
C23025  7-Carboxy-4-methyl-3,5-dioxoheptanoyl-CoA
C23026  5-Carboxy-2-methyl-3-oxopentanoyl-CoA
Reference
  Authors
Olivera ER, Luengo JM.
  Title
Steroids as Environmental Compounds Recalcitrant to Degradation: Genetic  Mechanisms of Bacterial Biodegradation Pathways.
  Journal
Genes (Basel) 10 (2019)
DOI:10.3390/genes10070512
Reference
  Authors
Horinouchi M, Hayashi T, Kudo T
  Title
Steroid degradation in Comamonas testosteroni.
  Journal
J Steroid Biochem Mol Biol 129:4-14 (2012)
DOI:10.1016/j.jsbmb.2010.10.008
Reference
  Authors
Horinouchi M, Kurita T, Hayashi T, Kudo T
  Title
Steroid degradation genes in Comamonas testosteroni TA441: Isolation of genes encoding a Delta4(5)-isomerase and 3alpha- and 3beta-dehydrogenases and evidence for a 100 kb steroid degradation gene hot spot.
  Journal
J Steroid Biochem Mol Biol 122:253-63 (2010)
DOI:10.1016/j.jsbmb.2010.06.002
Reference
  Authors
Horinouchi M, Hayashi T.
  Title
Identification of the Coenzyme A (CoA) Ester Intermediates and Genes Involved in  the Cleavage and Degradation of the Steroidal C-Ring by Comamonas testosteroni  TA441.
  Journal
Appl Environ Microbiol 87:e0110221 (2021)
DOI:10.1128/AEM.01102-21
Reference
  Authors
Horinouchi M, Hayashi T.
  Title
Comprehensive summary of steroid metabolism in Comamonas testosteroni TA441:  entire degradation process of basic four rings and removal of C12 hydroxyl group.
  Journal
Appl Environ Microbiol 89:e0014323 (2023)
DOI:10.1128/aem.00143-23
Reference
  Authors
Ouellet H, Johnston JB, de Montellano PR
  Title
Cholesterol catabolism as a therapeutic target in Mycobacterium tuberculosis.
  Journal
Trends Microbiol 19:530-9 (2011)
DOI:10.1016/j.tim.2011.07.009
Reference
  Authors
Van der Geize R, Yam K, Heuser T, Wilbrink MH, Hara H, Anderton MC, Sim E, Dijkhuizen L, Davies JE, Mohn WW, Eltis LD
  Title
A gene cluster encoding cholesterol catabolism in a soil actinomycete provides insight into Mycobacterium tuberculosis survival in macrophages.
  Journal
Proc Natl Acad Sci U S A 104:1947-52 (2007)
DOI:10.1073/pnas.0605728104
Reference
  Authors
Thomas ST, VanderVen BC, Sherman DR, Russell DG, Sampson NS
  Title
Pathway profiling in Mycobacterium tuberculosis: elucidation of cholesterol-derived catabolite and enzymes that catalyze its metabolism.
  Journal
J Biol Chem 286:43668-78 (2011)
DOI:10.1074/jbc.M111.313643
Reference
  Authors
Crowe AM, Casabon I, Brown KL, Liu J, Lian J, Rogalski JC, Hurst TE, Snieckus V, Foster LJ, Eltis LD.
  Title
Catabolism of the Last Two Steroid Rings in Mycobacterium tuberculosis and Other  Bacteria.
  Journal
mBio 8 (2017)
DOI:10.1128/mBio.00321-17
Reference
  Authors
Yuan T, Werman JM, Yin X, Yang M, Garcia-Diaz M, Sampson NS.
  Title
Enzymatic beta-Oxidation of the Cholesterol Side Chain in Mycobacterium tuberculosis  Bifurcates Stereospecifically at Hydration of 3-Oxo-cholest-4,22-dien-24-oyl-CoA.
  Journal
ACS Infect Dis 7:1739-1751 (2021)
DOI:10.1021/acsinfecdis.1c00069
Related
pathway
msg00010  Glycolysis / Gluconeogenesis
msg00020  Citrate cycle (TCA cycle)
msg00100  Steroid biosynthesis
msg00640  Propanoate metabolism
KO pathway
ko00984   

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