KEGG   PATHWAY: ocu03022
Entry
ocu03022                    Pathway                                
Name
Basal transcription factors - Oryctolagus cuniculus (rabbit)
Class
Genetic Information Processing; Transcription
Pathway map
ocu03022  Basal transcription factors
ocu03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Oryctolagus cuniculus (rabbit) [GN:ocu]
Gene
100357517  transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
100534011  GTF2A1L; TFIIA-alpha and beta-like factor [KO:K03122]
100355396  transcription initiation factor IIA subunit 2 [KO:K03123]
100359058  transcription initiation factor IIB [KO:K03124]
100343365  TATA-box-binding protein [KO:K03120]
100346981  TATA box-binding protein-like 1 isoform X2 [KO:K03120]
100349947  TATA box-binding protein-like 2 [KO:K03120]
100348935  transcription initiation factor TFIID subunit 1 isoform X5 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
100353006  transcription initiation factor TFIID subunit 2 isoform X6 [KO:K03128]
100353662  transcription initiation factor TFIID subunit 7 [KO:K03132]
103351964  transcription initiation factor TFIID subunit 7-like isoform X1 [KO:K03132]
100350499  transcription initiation factor TFIID subunit 8 isoform X2 [KO:K14649]
100339754  transcription initiation factor TFIID subunit 3 isoform X1 [KO:K14650]
127489378  transcription initiation factor TFIID subunit 3-like [KO:K14650]
100356523  transcription initiation factor TFIID subunit 10 [KO:K03134]
100339666  TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
100349019  transcription initiation factor TFIID subunit 5 [KO:K03130]
100339543  transcription initiation factor TFIID subunit 4 [KO:K03129]
100349838  transcription initiation factor TFIID subunit 4B isoform X1 [KO:K03129]
100352341  transcription initiation factor TFIID subunit 12 isoform X2 [KO:K03126]
127482825  transcription initiation factor TFIID subunit 12-like [KO:K03126]
100339101  TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
100343174  transcription initiation factor TFIID subunit 6 isoform X1 [KO:K03131]
127492732  transcription initiation factor TFIID subunit 9 [KO:K14535]
100338016  transcription initiation factor TFIID subunit 9B [KO:K03133]
100342427  transcription initiation factor TFIID subunit 9B-like [KO:K03133]
100356199  transcription initiation factor TFIID subunit 11 isoform X1 [KO:K03135]
100340414  transcription initiation factor TFIID subunit 13 [KO:K03127]
100348020  TATA-binding protein-associated factor 2N [KO:K14651]
100343990  general transcription factor IIE subunit 1 [KO:K03136]
100338045  transcription initiation factor IIE subunit beta [KO:K03137]
100339233  general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
100342919  general transcription factor IIH subunit 1 isoform X1 [KO:K03141]
100338745  general transcription factor IIH subunit 2-like protein [KO:K03142]
100347110  general transcription factor IIH subunit 3 isoform X2 [KO:K03143]
127493056  general transcription factor IIH subunit 4 isoform X1 [KO:K03144]
100348395  general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
103349943  general transcription factor IIH subunit 5 [KO:K10845]
100358882  cyclin-dependent kinase 7 isoform X1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
100349698  CDK-activating kinase assembly factor MAT1 [KO:K10842]
100358948  cyclin-H [KO:K06634]
100339683  general transcription factor II-I isoform X1 [KO:K03121]
127488037  general transcription factor II-I-like [KO:K03121]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
ocu03020  RNA polymerase
ocu03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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