KEGG   PATHWAY: aamp03250
Entry
aamp03250                   Pathway                                
Name
Viral life cycle - HIV-1 - Arvicola amphibius (Eurasian water vole)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
aamp03250  Viral life cycle - HIV-1
aamp03250

Organism
Arvicola amphibius (Eurasian water vole) [GN:aamp]
Gene
119809618  C-C chemokine receptor type 5-like [KO:K04180]
119827638  Cxcr4; C-X-C chemokine receptor type 4 [KO:K04189]
119807903  Cd4; T-cell surface glycoprotein CD4 [KO:K06454]
119815588  Map1a; microtubule-associated protein 1A [KO:K10429]
119809760  Map1b; microtubule-associated protein 1B [KO:K10429]
119811983  Map1s; microtubule-associated protein 1S [KO:K10429]
119808410  Bicd1; protein bicaudal D homolog 1 isoform X1 [KO:K18739]
119817491  Bicd2; protein bicaudal D homolog 2 isoform X1 [KO:K18739]
119821348  tripartite motif-containing protein 30A-like [KO:K10648] [EC:2.3.2.27]
119821581  tripartite motif-containing protein 30A-like isoform X1 [KO:K10648] [EC:2.3.2.27]
119810418  tripartite motif-containing protein 30A-like isoform X1 [KO:K10648] [EC:2.3.2.27]
119825440  tripartite motif-containing protein 30A-like [KO:K10648] [EC:2.3.2.27]
119819822  tripartite motif-containing protein 30A-like isoform X1 [KO:K10648] [EC:2.3.2.27]
119824003  DNA dC->dU-editing enzyme APOBEC-3-like [KO:K18750] [EC:3.5.4.-]
119814414  Samhd1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [KO:K22544] [EC:3.1.5.-]
119816144  Psip1; PC4 and SFRS1-interacting protein isoform X1 [KO:K25057]
119809923  Pin1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
119823183  Smarcb1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 [KO:K11648]
119814577  Ppia; peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
119800897  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119804348  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119802092  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119802145  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119823116  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119802806  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119823286  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119816931  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119804771  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119804874  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119805071  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119812547  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119826418  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
119827164  peptidyl-prolyl cis-trans isomerase A-like [KO:K03767] [EC:5.2.1.8]
119800165  peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
119808421  Cpsf7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 [KO:K14398]
119803659  Cpsf6; LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6 [KO:K14398]
119806349  Tnpo3; transportin-3 isoform X1 [KO:K15436]
119824623  Mx1; interferon-induced GTP-binding protein Mx1 [KO:K14754]
119825258  interferon-induced GTP-binding protein Mx1-like isoform X1 [KO:K14754]
119822270  Ranbp2; E3 SUMO-protein ligase RanBP2 [KO:K12172] [EC:2.3.2.-]
119816924  Nup153; LOW QUALITY PROTEIN: nuclear pore complex protein Nup153 [KO:K14296]
119822927  Ep300; histone acetyltransferase p300 [KO:K04498] [EC:2.3.1.48]
119811558  LOW QUALITY PROTEIN: CREB-binding protein [KO:K04498] [EC:2.3.1.48]
119822373  Kat2b; LOW QUALITY PROTEIN: histone acetyltransferase KAT2B [KO:K06062] [EC:2.3.1.48]
119812579  Kat2a; histone acetyltransferase KAT2A isoform X1 [KO:K06062] [EC:2.3.1.48]
119818868  Cdk9; cyclin-dependent kinase 9 [KO:K02211] [EC:2.7.11.22 2.7.11.23]
119828142  Ccnt2; cyclin-T2 isoform X1 [KO:K15188]
119823522  Ccnt1; cyclin-T1 [KO:K15188]
119812121  Aff4; AF4/FMR2 family member 4 [KO:K15185]
119809560  Ell2; RNA polymerase II elongation factor ELL2 [KO:K15183]
119804497  RNA polymerase II elongation factor ELL2-like [KO:K15183]
119812656  Ell; RNA polymerase II elongation factor ELL isoform X1 [KO:K15183]
119814119  Ell3; RNA polymerase II elongation factor ELL3 isoform X1 [KO:K15183]
119816801  Mllt3; protein AF-9 [KO:K15187]
119823415  Mllt1; protein ENL isoform X1 [KO:K15187]
119827334  Nelfa; negative elongation factor A [KO:K15179]
119819721  Nelfb; negative elongation factor B [KO:K15180]
119814225  Nelfcd; negative elongation factor C/D isoform X1 [KO:K15181]
119822486  Nelfe; negative elongation factor E [KO:K15182]
119811306  Supt4h1; transcription elongation factor SPT4 [KO:K15171]
119820477  Supt5h; LOW QUALITY PROTEIN: transcription elongation factor SPT5 [KO:K15172]
119814368  Xpo1; exportin-1 isoform X1 [KO:K14290]
119824746  Ran; GTP-binding nuclear protein Ran [KO:K07936]
119819391  LOW QUALITY PROTEIN: GTP-binding nuclear protein Ran-like [KO:K07936]
119826773  GTP-binding nuclear protein Ran-like [KO:K07936]
119802618  Furin; furin [KO:K01349] [EC:3.4.21.75]
119815558  Serinc3; serine incorporator 3 [KO:K25661]
119810136  Serinc5; serine incorporator 5 [KO:K25655]
119812529  Bst2; bone marrow stromal antigen 2 [KO:K06731]
119813698  Hgs; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182]
119802842  Tsg101; tumor susceptibility gene 101 protein [KO:K12183]
119812536  Chmp6; charged multivesicular body protein 6 [KO:K12195]
119814567  Chmp4b; charged multivesicular body protein 4b [KO:K12194]
119809114  programmed cell death 6-interacting protein [KO:K12200]
119827608  Vps4b; vacuolar protein sorting-associated protein 4B isoform X1 [KO:K12196]
119801774  Vps4a; vacuolar protein sorting-associated protein 4A [KO:K12196]
Reference
PMID:27357278
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
PMID:21284899
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
PMID:31028522
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
PMID:30286189
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
PMID:25036886
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
PMID:32429351
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
PMID:21360054
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
PMID:19865606
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
PMID:32858867
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Related
pathway
aamp03013  Nucleocytoplasmic transport
aamp04144  Endocytosis
KO pathway
ko03250   
LinkDB

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