Entry
Name
Endocytosis - Arvicola amphibius (Eurasian water vole)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Other DBs
Organism
Arvicola amphibius (Eurasian water vole) [GN:
aamp ]
Gene
119801308 Vps45; vacuolar protein sorting-associated protein 45 [KO:K12479 ]
119801774 Vps4a; vacuolar protein sorting-associated protein 4A [KO:K12196 ]
119801992 Vps35; vacuolar protein sorting-associated protein 35 [KO:K18468 ]
119802215 Pard6a; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
119803316 Agap2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
119804732 Sh3kbp1; SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
119805111 Iqsec2; IQ motif and SEC7 domain-containing protein 2 isoform X1 [KO:K12495 ]
119806505 Wasl; neural Wiskott-Aldrich syndrome protein isoform X1 [KO:K23612 ]
119806695 Iqsec1; IQ motif and SEC7 domain-containing protein 1 isoform X1 [KO:K12495 ]
119807550 Asap2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
119807940 Iqsec3; IQ motif and SEC7 domain-containing protein 3 isoform X1 [KO:K12495 ]
119808051 Wipf3; WAS/WASL-interacting protein family member 3 isoform X1 [KO:K19475 ]
119808246 Agap3; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
119808460 Rab11fip5; rab11 family-interacting protein 5 isoform X1 [KO:K12484 ]
119808883 Vps26b; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
119808893 Arap1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
119809060 Zfyve16; zinc finger FYVE domain-containing protein 16 [KO:K04679 ]
119811148 Gbf1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [KO:K18443 ]
119811165 Eps15l1; epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
119811224 Psd3; PH and SEC7 domain-containing protein 3 isoform X1 [KO:K12494 ]
119811681 Vps37a; vacuolar protein sorting-associated protein 37A isoform X1 [KO:K12185 ]
119812052 Acap1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 [KO:K12489 ]
119812232 Rab11fip4; rab11 family-interacting protein 4 isoform X1 [KO:K12485 ]
119812237 Vps25; vacuolar protein-sorting-associated protein 25 [KO:K12189 ]
119812894 Rab11fip3; rab11 family-interacting protein 3 isoform X1 [KO:K12485 ]
119813031 Rab11fip1; rab11 family-interacting protein 1 isoform X1 [KO:K12484 ]
119813139 Vps36; vacuolar protein-sorting-associated protein 36 [KO:K12190 ]
119813312 Arap2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 [KO:K18440 ]
119813698 Hgs; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
119814204 Arfgef2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1 [KO:K18442 ]
119814639 Arap3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
119814780 Bin1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
119814979 Psd2; PH and SEC7 domain-containing protein 2 isoform X1 [KO:K12494 ]
119815058 Arfgap1; ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [KO:K12492 ]
119815852 Arfgap2; ADP-ribosylation factor GTPase-activating protein 2 isoform X1 [KO:K12493 ]
119816116 Zfyve9; zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
119816432 Vps37c; vacuolar protein sorting-associated protein 37C [KO:K12185 ]
119816447 Ldlrap1; low density lipoprotein receptor adapter protein 1 [KO:K12474 ]
119816909 Eps15; epidermal growth factor receptor substrate 15 isoform X1 [KO:K12472 ]
119817045 Smap2; stromal membrane-associated protein 2 isoform X1 [KO:K12486 ]
119817472 Asap3; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 [KO:K12488 ]
119817478 Dnajc6; putative tyrosine-protein phosphatase auxilin [KO:K09526 ]
119817488 Acap3; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 [KO:K12489 ]
119817726 Rab11fip2; rab11 family-interacting protein 2 isoform X1 [KO:K12484 ]
119819611 Arpc5l; actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
119819754 Pip5kl1; LOW QUALITY PROTEIN: phosphatidylinositol 4-phosphate 5-kinase-like protein 1 [KO:K13712 ] [EC:2.7.1.68 ]
119820331 Igf2r; cation-independent mannose-6-phosphate receptor [KO:K06564 ]
119820692 Agap1; LOW QUALITY PROTEIN: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 [KO:K12491 ]
119821366 Vta1; vacuolar protein sorting-associated protein VTA1 homolog isoform X1 [KO:K12199 ]
119822242 Rufy2; RUN and FYVE domain-containing protein 2 isoform X1 [KO:K12482 ]
119822825 Vps28; vacuolar protein sorting-associated protein 28 homolog [KO:K12184 ]
119823002 Asap1; LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 [KO:K12488 ]
119823053 Vps26a; vacuolar protein sorting-associated protein 26A [KO:K18466 ]
119823292 Smap1; stromal membrane-associated protein 1 isoform X1 [KO:K12486 ]
119823321 Arfgap3; ADP-ribosylation factor GTPase-activating protein 3 isoform X1 [KO:K12493 ]
119823911 Psd; PH and SEC7 domain-containing protein 1 isoform X1 [KO:K12494 ]
119824688 Acap2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12489 ]
119824878 Vps37d; vacuolar protein sorting-associated protein 37D [KO:K12185 ]
119825239 Vps29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
119825409 Vps37b; vacuolar protein sorting-associated protein 37B [KO:K12185 ]
119826197 Arfgef1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
119827066 Hspa6; LOW QUALITY PROTEIN: heat shock 70 kDa protein 6 [KO:K03283 ]
119827608 Vps4b; vacuolar protein sorting-associated protein 4B isoform X1 [KO:K12196 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
aamp04060 Cytokine-cytokine receptor interaction
aamp04070 Phosphatidylinositol signaling system
aamp04130 SNARE interactions in vesicular transport
KO pathway