KEGG   PATHWAY: aly00250
Entry
aly00250                    Pathway                                
Name
Alanine, aspartate and glutamate metabolism - Arabidopsis lyrata (lyrate rockcress)
Class
Metabolism; Amino acid metabolism
Pathway map
aly00250  Alanine, aspartate and glutamate metabolism
aly00250

Module
aly_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:aly00250]
Other DBs
GO: 0006522 0006531 0006536
Organism
Arabidopsis lyrata (lyrate rockcress) [GN:aly]
Gene
9322519  aspartate aminotransferase, cytoplasmic isozyme 2 [KO:K14454] [EC:2.6.1.1]
9307962  aspartate aminotransferase, cytoplasmic isozyme 1 [KO:K14454] [EC:2.6.1.1]
9307549  aspartate aminotransferase 3, chloroplastic [KO:K14454] [EC:2.6.1.1]
9317213  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
9305371  aspartate aminotransferase, chloroplastic [KO:K00811] [EC:2.6.1.1]
9309759  L-aspartate oxidase, chloroplastic [KO:K00278] [EC:1.4.3.16]
9319048  probable isoaspartyl peptidase/L-asparaginase 2 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
9307378  isoaspartyl peptidase/L-asparaginase 1 isoform X1 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
9302719  LOW QUALITY PROTEIN: asparagine synthetase [glutamine-hydrolyzing] 2 [KO:K01953] [EC:6.3.5.4]
9309514  asparagine synthetase [glutamine-hydrolyzing] 3 [KO:K01953] [EC:6.3.5.4]
9313622  asparagine synthetase [glutamine-hydrolyzing] 1 [KO:K01953] [EC:6.3.5.4]
9309615  omega-amidase, chloroplastic [KO:K13566] [EC:3.5.1.3]
9324933  alanine aminotransferase 2, mitochondrial isoform X1 [KO:K00814] [EC:2.6.1.2]
9326279  alanine aminotransferase 1, mitochondrial [KO:K00814] [EC:2.6.1.2]
9321937  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
9302946  alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
9315810  alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
9318653  alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
9329338  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
9323376  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
9303713  argininosuccinate synthase, chloroplastic [KO:K01940] [EC:6.3.4.5]
9307514  argininosuccinate lyase, chloroplastic [KO:K01755] [EC:4.3.2.1]
9312495  adenylosuccinate synthetase, chloroplastic [KO:K01939] [EC:6.3.4.4]
9321624  LOW QUALITY PROTEIN: uncharacterized protein LOC9321624 [KO:K01756] [EC:4.3.2.2]
9304063  uncharacterized protein LOC9304063 [KO:K01756] [EC:4.3.2.2]
9321433  aspartate carbamoyltransferase, chloroplastic isoform X1 [KO:K00609] [EC:2.1.3.2]
9312861  glutamate decarboxylase 4 [KO:K01580] [EC:4.1.1.15]
110227991  glutamate decarboxylase 3-like isoform X1 [KO:K01580] [EC:4.1.1.15]
9324534  glutamate decarboxylase 2 [KO:K01580] [EC:4.1.1.15]
9319152  glutamate decarboxylase 5 [KO:K01580] [EC:4.1.1.15]
9309890  glutamate decarboxylase 1 [KO:K01580] [EC:4.1.1.15]
9321553  gamma-aminobutyrate transaminase POP2, mitochondrial [KO:K16871] [EC:2.6.1.96]
9325308  succinate-semialdehyde dehydrogenase, mitochondrial [KO:K17761] [EC:1.2.1.24]
9300320  glutamate synthase 1 [NADH], chloroplastic isoform X1 [KO:K00264] [EC:1.4.1.14]
9307875  glutamate dehydrogenase 1 isoform X1 [KO:K00261] [EC:1.4.1.3]
9320484  probable glutamate dehydrogenase 3 [KO:K00261] [EC:1.4.1.3]
9307342  glutamate dehydrogenase 2 [KO:K00261] [EC:1.4.1.3]
9330391  NADP-specific glutamate dehydrogenase [KO:K00262] [EC:1.4.1.4]
9302569  delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [KO:K00294] [EC:1.2.1.88]
9304500  glutamine synthetase, chloroplastic/mitochondrial [KO:K01915] [EC:6.3.1.2]
9306616  glutamine synthetase cytosolic isozyme 1-1 isoform X1 [KO:K01915] [EC:6.3.1.2]
9327498  glutamine synthetase cytosolic isozyme 1-5 [KO:K01915] [EC:6.3.1.2]
9307795  glutamine synthetase cytosolic isozyme 1-4 isoform X1 [KO:K01915] [EC:6.3.1.2]
9324551  glutamine synthetase cytosolic isozyme 1-2 isoform X1 [KO:K01915] [EC:6.3.1.2]
9319155  glutamine synthetase cytosolic isozyme 1-3 [KO:K01915] [EC:6.3.1.2]
9326899  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
9321308  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
9298336  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
9313138  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
9321686  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 [KO:K00820] [EC:2.6.1.16]
9301675  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 [KO:K00820] [EC:2.6.1.16]
9320072  amidophosphoribosyltransferase 1, chloroplastic [KO:K00764] [EC:2.4.2.14]
110226214  amidophosphoribosyltransferase 2, chloroplastic [KO:K00764] [EC:2.4.2.14]
9304941  amidophosphoribosyltransferase 3, chloroplastic [KO:K00764] [EC:2.4.2.14]
Compound
C00014  Ammonia
C00022  Pyruvate
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00041  L-Alanine
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00122  Fumarate
C00152  L-Asparagine
C00158  Citrate
C00169  Carbamoyl phosphate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00352  D-Glucosamine 6-phosphate
C00402  D-Aspartate
C00438  N-Carbamoyl-L-aspartate
C00940  2-Oxoglutaramate
C01042  N-Acetyl-L-aspartate
C02362  2-Oxosuccinamate
C03090  5-Phosphoribosylamine
C03406  N-(L-Arginino)succinate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03912  (S)-1-Pyrroline-5-carboxylate
C12270  N-Acetylaspartylglutamate
C20775  beta-Citryl-L-glutamate
C20776  N-Acetylaspartylglutamylglutamate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:9687539
  Authors
Wu G
  Title
Intestinal mucosal amino acid catabolism.
  Journal
J Nutr 128:1249-52 (1998)
DOI:10.1093/jn/128.8.1249
Related
pathway
aly00010  Glycolysis / Gluconeogenesis
aly00020  Citrate cycle (TCA cycle)
aly00220  Arginine biosynthesis
aly00230  Purine metabolism
aly00240  Pyrimidine metabolism
aly00260  Glycine, serine and threonine metabolism
aly00261  Monobactam biosynthesis
aly00300  Lysine biosynthesis
aly00330  Arginine and proline metabolism
aly00340  Histidine metabolism
aly00410  beta-Alanine metabolism
aly00460  Cyanoamino acid metabolism
aly00470  D-Amino acid metabolism
aly00480  Glutathione metabolism
aly00520  Amino sugar and nucleotide sugar metabolism
aly00620  Pyruvate metabolism
aly00630  Glyoxylate and dicarboxylate metabolism
aly00650  Butanoate metabolism
aly00660  C5-Branched dibasic acid metabolism
aly00760  Nicotinate and nicotinamide metabolism
aly00770  Pantothenate and CoA biosynthesis
aly00860  Porphyrin metabolism
aly00910  Nitrogen metabolism
KO pathway
ko00250   
LinkDB

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