KEGG   PATHWAY: bna03020
Entry
bna03020                    Pathway                                
Name
RNA polymerase - Brassica napus (rape)
Class
Genetic Information Processing; Transcription
Pathway map
bna03020  RNA polymerase
bna03020

Other DBs
GO: 0000428
Organism
Brassica napus (rape) [GN:bna]
Gene
11542067  rpoB; RNA polymerase beta subunit [KO:K03043] [EC:2.7.7.6]
11542066  rpoC2; RNA polymerase beta'' subunit [KO:K03046] [EC:2.7.7.6]
11542107  rpoC1; RNA polymerase beta' subunit [KO:K03046] [EC:2.7.7.6]
125595940  DNA-directed RNA polymerase subunit beta' isoform X1 [KO:K03046] [EC:2.7.7.6]
125599361  DNA-directed RNA polymerase subunit beta' isoform X1 [KO:K03046] [EC:2.7.7.6]
125601412  DNA-directed RNA polymerase subunit beta' isoform X1 [KO:K03046] [EC:2.7.7.6]
125602803  DNA-directed RNA polymerase subunit beta' isoform X1 [KO:K03046] [EC:2.7.7.6]
125604864  DNA-directed RNA polymerase subunit beta' isoform X1 [KO:K03046] [EC:2.7.7.6]
11542055  rpoA; RNA polymerase alpha subunit [KO:K03040] [EC:2.7.7.6]
125598836  DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
125599521  DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
106360991  DNA-directed RNA polymerase II subunit 2-like [KO:K03010] [EC:2.7.7.6]
106347907  DNA-directed RNA polymerase II subunit 2 [KO:K03010] [EC:2.7.7.6]
106396119  DNA-directed RNA polymerase II subunit 2 [KO:K03010] [EC:2.7.7.6]
106401389  DNA-directed RNA polymerase II subunit 2 [KO:K03010] [EC:2.7.7.6]
106432135  DNA-directed RNA polymerase II subunit 2 isoform X1 [KO:K03010] [EC:2.7.7.6]
111213393  DNA-directed RNA polymerase II subunit 2 [KO:K03010] [EC:2.7.7.6]
106351723  DNA-directed RNA polymerase II subunit RPB1-like [KO:K03006] [EC:2.7.7.6]
106361293  LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1 [KO:K03006] [EC:2.7.7.6]
106354225  DNA-directed RNA polymerase II subunit RPB1-like [KO:K03006] [EC:2.7.7.6]
106361294  DNA-directed RNA polymerase II subunit RPB1 isoform X1 [KO:K03006] [EC:2.7.7.6]
125583785  DNA-directed RNA polymerase II subunit RPB1-like [KO:K03006] [EC:2.7.7.6]
106450001  DNA-directed RNA polymerases II, IV and V subunit 3-like [KO:K03011]
106445647  DNA-directed RNA polymerases II, IV and V subunit 3 [KO:K03011]
106371538  DNA-directed RNA polymerases II, IV and V subunit 3 [KO:K03011]
106448063  DNA-directed RNA polymerases II, IV and V subunit 3-like [KO:K03011]
106409313  DNA-directed RNA polymerases II, IV and V subunit 3 [KO:K03011]
106367853  DNA-directed RNA polymerases II, IV and V subunit 11 [KO:K03008]
106390724  DNA-directed RNA polymerases II, IV and V subunit 11-like isoform X1 [KO:K03008]
106445664  DNA-directed RNA polymerases II, IV and V subunit 11-like [KO:K03008]
106424969  DNA-directed RNA polymerases II, IV and V subunit 11 [KO:K03008]
106454364  DNA-directed RNA polymerases IV and V subunit 4-like [KO:K03012]
106441264  DNA-directed RNA polymerase II subunit 4-like [KO:K03012]
106446836  DNA-directed RNA polymerase II subunit 4-like [KO:K03012]
106430480  DNA-directed RNA polymerase II subunit 4 [KO:K03012]
106426685  DNA-directed RNA polymerase II subunit 4-like [KO:K03012]
106383040  DNA-directed RNA polymerase II subunit 4 [KO:K03012]
106381941  DNA-directed RNA polymerases IV and V subunit 4 [KO:K03012]
106384918  DNA-directed RNA polymerase II subunit 4 [KO:K03012]
106417662  DNA-directed RNA polymerase II subunit 4 [KO:K03012]
106419055  DNA-directed RNA polymerase II subunit 4 [KO:K03012]
125594072  DNA-directed RNA polymerases IV and V subunit 4-like [KO:K03012]
106443258  LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB7 [KO:K03015]
106387236  DNA-directed RNA polymerase II subunit 7 [KO:K03015]
106420333  DNA-directed RNA polymerase II subunit 7 [KO:K03015]
111215664  DNA-directed RNA polymerase II subunit RPB7-like isoform X1 [KO:K03015]
111202363  DNA-directed RNA polymerase II subunit 7 [KO:K03015]
106386472  DNA-directed RNA polymerase II subunit 7-like [KO:K03015]
106360661  DNA-directed RNA polymerases II, IV and V subunit 9B [KO:K03017]
106378017  DNA-directed RNA polymerases II, IV and V subunit 9A [KO:K03017]
106391781  DNA-directed RNA polymerases II, IV and V subunit 9A-like isoform X1 [KO:K03017]
106413764  DNA-directed RNA polymerases II, IV and V subunit 9B [KO:K03017]
125593482  DNA-directed RNA polymerases II, IV and V subunit 9B [KO:K03017]
106378370  DNA-directed RNA polymerase III subunit 2-like [KO:K03021] [EC:2.7.7.6]
106391306  DNA-directed RNA polymerase III subunit 2 [KO:K03021] [EC:2.7.7.6]
106386379  DNA-directed RNA polymerase III subunit 2 [KO:K03021] [EC:2.7.7.6]
106385775  DNA-directed RNA polymerase III subunit 1 [KO:K03018] [EC:2.7.7.6]
106350139  DNA-directed RNA polymerase III subunit 1 [KO:K03018] [EC:2.7.7.6]
106448750  DNA-directed RNA polymerases I and III subunit RPAC2-like [KO:K03020]
106451529  DNA-directed RNA polymerases I and III subunit RPAC2 [KO:K03020]
106454933  DNA-directed RNA polymerases I and III subunit RPAC2-like [KO:K03020]
125609441  DNA-directed RNA polymerases I and III subunit RPAC2-like [KO:K03020]
106366576  DNA-directed RNA polymerases I and III subunit RPAC1 [KO:K03027]
106452553  DNA-directed RNA polymerases I and III subunit RPAC1 [KO:K03027]
106449894  DNA-directed RNA polymerases I and III subunit rpac1-like [KO:K03027]
106435010  DNA-directed RNA polymerases I and III subunit rpac1 [KO:K03027]
125579279  DNA-directed RNA polymerases I and III subunit rpac1-like [KO:K03027]
106365520  uncharacterized protein LOC106365520 [KO:K03023]
106387833  uncharacterized protein LOC106387833 isoform X1 [KO:K03023]
106439689  uncharacterized protein BNAA01G14530D isoform X1 [KO:K03026]
106444466  uncharacterized protein BNAC09G47140D isoform X1 [KO:K03026]
106346571  uncharacterized protein LOC106346571 [KO:K03026]
106419349  uncharacterized protein LOC106419349 isoform X1 [KO:K03026]
106348801  DNA-directed RNA polymerase III subunit RPC5 isoform X2 [KO:K14721]
106348864  DNA-directed RNA polymerase III subunit RPC5 isoform X1 [KO:K14721]
106364850  DNA-directed RNA polymerase III subunit RPC5 [KO:K14721]
106378874  DNA-directed RNA polymerase III subunit rpc5-like [KO:K14721]
106348312  DNA-directed RNA polymerase III subunit rpc6 [KO:K03025]
106365492  DNA-directed RNA polymerase III subunit rpc6 [KO:K03025]
111208182  DNA-directed RNA polymerase III subunit rpc6-like [KO:K03025]
106428412  probable DNA-directed RNA polymerase III subunit rpc6 [KO:K03025]
106434882  DNA-directed RNA polymerase III subunit rpc31 [KO:K03024]
106405861  uncharacterized protein LOC106405861 [KO:K03024]
106423224  DNA-directed RNA polymerase III subunit rpc31-like [KO:K03024]
125594029  DNA-directed RNA polymerase III subunit rpc31-like [KO:K03024]
106420157  DNA-directed RNA polymerase III subunit RPC8 [KO:K03022]
125591420  DNA-directed RNA polymerase III subunit RPC8-like isoform X1 [KO:K03022]
106425949  uncharacterized protein LOC106425949 [KO:K25304]
125574923  uncharacterized protein LOC125574923 [KO:K25304]
125601713  uncharacterized protein LOC125601713 [KO:K25304]
106352537  DNA-directed RNA polymerase III subunit RPC10-like [KO:K03019]
106364755  DNA-directed RNA polymerase III subunit RPC10 [KO:K03019]
106377365  DNA-directed RNA polymerase III subunit RPC10 [KO:K03019]
106386893  DNA-directed RNA polymerase III subunit RPC10 [KO:K03019]
106419677  DNA-directed RNA polymerase III subunit RPC10-like [KO:K03019]
106355081  DNA-directed RNA polymerase I subunit 2 [KO:K03002] [EC:2.7.7.6]
106421799  DNA-directed RNA polymerase I subunit 2 [KO:K03002] [EC:2.7.7.6]
106368196  DNA-directed RNA polymerase I subunit 1 [KO:K02999] [EC:2.7.7.6]
106376431  DNA-directed RNA polymerase I subunit 1-like [KO:K02999] [EC:2.7.7.6]
106351499  DNA-directed RNA polymerase I subunit RPA12 [KO:K03000]
106374391  DNA-directed RNA polymerase I subunit RPA12 [KO:K03000]
106386032  DNA-directed RNA polymerase I subunit RPA12-like [KO:K03000]
106409267  DNA-directed RNA polymerase I subunit RPA12-like [KO:K03000]
106350895  DNA-directed RNA polymerase I subunit rpa49-like [KO:K03005]
106377555  DNA-directed RNA polymerase I subunit rpa49 [KO:K03005]
106391650  DNA-directed RNA polymerases IV and V subunit 5B-like [KO:K03013]
106356712  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
106368028  DNA-directed RNA polymerase V subunit 5A [KO:K03013]
106366939  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
106439634  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
106431075  DNA-directed RNA polymerases IV and V subunit 5B [KO:K03013]
106445468  DNA-directed RNA polymerase V subunit 5C [KO:K03013]
106431374  DNA-directed RNA polymerase V subunit 5C-like [KO:K03013]
106434433  DNA-directed RNA polymerases II and IV subunit 5A-like [KO:K03013]
106435549  DNA-directed RNA polymerase subunit 5-like protein 1 [KO:K03013]
106386741  DNA-directed RNA polymerase subunit 5-like protein 1 [KO:K03013]
106412073  DNA-directed RNA polymerase V subunit 5A [KO:K03013]
106418028  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
106386345  DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 [KO:K03013]
125599283  DNA-directed RNA polymerase subunit 5-like protein 1 [KO:K03013]
125600349  DNA-directed RNA polymerases II and IV subunit 5A-like [KO:K03013]
106446012  DNA-directed RNA polymerases II, IV and V subunit 6A [KO:K03014]
106390928  DNA-directed RNA polymerases II, IV and V subunit 6A [KO:K03014]
106390217  DNA-directed RNA polymerases II, IV and V subunit 6A [KO:K03014]
106401954  DNA-directed RNA polymerases II, IV and V subunit 6A [KO:K03014]
106368445  DNA-directed RNA polymerases II, IV and V subunit 8B [KO:K03016]
111208524  DNA-directed RNA polymerases II, IV and V subunit 8B [KO:K03016]
106350995  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
106431483  DNA-directed RNA polymerases II, IV and V subunit 12-like [KO:K03009]
106375011  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
106359440  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
106367663  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
125603040  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
106362151  DNA-directed RNA polymerases I, II, and III subunit RPABC5 [KO:K03007]
106366999  DNA-directed RNA polymerases I, II, and III subunit RPABC5 [KO:K03007]
106449027  DNA-directed RNA polymerases I, II, and III subunit RPABC5 [KO:K03007]
106374811  DNA-directed RNA polymerase subunit 10-like protein [KO:K03007]
106374839  DNA-directed RNA polymerase subunit 10-like protein [KO:K03007]
106399422  DNA-directed RNA polymerases I, II, and III subunit RPABC5 [KO:K03007]
106346632  DNA-directed RNA polymerase IV subunit 1-like [KO:K16250] [EC:2.7.7.6]
106406243  DNA-directed RNA polymerase IV subunit 1 [KO:K16250] [EC:2.7.7.6]
106420995  DNA-directed RNA polymerase IV subunit 1 [KO:K16250] [EC:2.7.7.6]
106411678  DNA-directed RNA polymerase IV subunit 1-like [KO:K16250] [EC:2.7.7.6]
106438049  DNA-directed RNA polymerase V subunit 1 isoform X1 [KO:K16251] [EC:2.7.7.6]
106420756  DNA-directed RNA polymerase V subunit 1-like [KO:K16251] [EC:2.7.7.6]
106390128  DNA-directed RNA polymerases IV and V subunit 2 [KO:K16252] [EC:2.7.7.6]
106390129  DNA-directed RNA polymerases IV and V subunit 2 [KO:K16252] [EC:2.7.7.6]
106360610  DNA-directed RNA polymerase V subunit 7 [KO:K16253]
106365717  DNA-directed RNA polymerase subunit 7-like protein [KO:K16253]
106367626  DNA-directed RNA polymerase subunit 7-like protein [KO:K16253]
106453721  DNA-directed RNA polymerase IV subunit 7-like [KO:K16253]
106412030  DNA-directed RNA polymerase V subunit 7 [KO:K16253]
125576611  DNA-directed RNA polymerase IV subunit 7-like [KO:K16253]
Reference
PMID:10499798
  Authors
Zhang G, Campbell EA, Minakhin L, Richter C, Severinov K, Darst SA.
  Title
Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.
  Journal
Cell 98:811-824 (1999)
DOI:10.1016/S0092-8674(00)81515-9
Reference
PMID:10784442
  Authors
Cramer P, Bushnell DA, Fu J, Gnatt AL, Maier-Davis B, Thompson NE, Burgess RR, Edwards AM, David PR, Kornberg RD.
  Title
Architecture of RNA polymerase II and implications for the transcription mechanism.
  Journal
Science 288:640-649 (2000)
DOI:10.1126/science.288.5466.640
Reference
PMID:19880312
  Authors
Hirata A, Murakami KS
  Title
Archaeal RNA polymerase.
  Journal
Curr Opin Struct Biol 19:724-31 (2009)
DOI:10.1016/j.sbi.2009.10.006
Reference
PMID:18573085
  Authors
Cramer P, Armache KJ, Baumli S, Benkert S, Brueckner F, Buchen C, Damsma GE, Dengl S, Geiger SR, Jasiak AJ, Jawhari A, Jennebach S, Kamenski T, Kettenberger H, Kuhn CD, Lehmann E, Leike K, Sydow JF, Vannini A
  Title
Structure of eukaryotic RNA polymerases.
  Journal
Annu Rev Biophys 37:337-52 (2008)
DOI:10.1146/annurev.biophys.37.032807.130008
Reference
PMID:31835031
  Authors
Hillen HS, Bartuli J, Grimm C, Dienemann C, Bedenk K, Szalay AA, Fischer U, Cramer P
  Title
Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.
  Journal
Cell 179:1525-1536.e12 (2019)
DOI:10.1016/j.cell.2019.11.023
KO pathway
ko03020   
LinkDB

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