KEGG   PATHWAY: cvf00240
Entry
cvf00240                    Pathway                                
Name
Pyrimidine metabolism - Charadrius vociferus (killdeer)
Class
Metabolism; Nucleotide metabolism
Pathway map
cvf00240  Pyrimidine metabolism
cvf00240

Module
cvf_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:cvf00240]
cvf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cvf00240]
cvf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cvf00240]
Other DBs
GO: 0006220 0006213
Organism
Charadrius vociferus (killdeer) [GN:cvf]
Gene
104294466  DHODH; dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
104288495  UMPS; uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
104286088  CMPK1; UMP-CMP kinase [KO:K13800] [EC:2.7.4.14]
104293739  CMPK2; UMP-CMP kinase 2, mitochondrial [KO:K13809] [EC:2.7.4.14]
104285573  NME6; nucleoside diphosphate kinase 6 [KO:K00940] [EC:2.7.4.6]
104292220  NME3; nucleoside diphosphate kinase 3 [KO:K00940] [EC:2.7.4.6]
104292292  NME7; nucleoside diphosphate kinase 7 [KO:K00940] [EC:2.7.4.6]
104281722  nucleoside diphosphate kinase isoform X1 [KO:K00940] [EC:2.7.4.6]
104294289  AK9; LOW QUALITY PROTEIN: adenylate kinase 9 [KO:K18533] [EC:2.7.4.3 2.7.4.6]
104291075  LOW QUALITY PROTEIN: ectonucleoside triphosphate diphosphohydrolase 8-like [KO:K01510] [EC:3.6.1.5]
104291111  ectonucleoside triphosphate diphosphohydrolase 8-like [KO:K01510] [EC:3.6.1.5]
104291112  ectonucleoside triphosphate diphosphohydrolase 8-like [KO:K01510] [EC:3.6.1.5]
104281565  ENTPD3; ectonucleoside triphosphate diphosphohydrolase 3 [KO:K01510] [EC:3.6.1.5]
104282381  ENTPD1; ectonucleoside triphosphate diphosphohydrolase 1 [KO:K01510] [EC:3.6.1.5]
104290142  CANT1; soluble calcium-activated nucleotidase 1 [KO:K12304] [EC:3.6.1.6]
104285650  ENTPD4; ectonucleoside triphosphate diphosphohydrolase 4 isoform X1 [KO:K12305] [EC:3.6.1.6]
104288197  ENTPD5; ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
104295131  ENTPD6; ectonucleoside triphosphate diphosphohydrolase 6 [KO:K01511] [EC:3.6.1.6]
104282094  ENPP1; LOW QUALITY PROTEIN: ectonucleotide pyrophosphatase/phosphodiesterase family member 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
104282118  ENPP3; ectonucleotide pyrophosphatase/phosphodiesterase family member 3 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
104290364  ASMTL; N-acetylserotonin O-methyltransferase-like protein [KO:K25435] [EC:3.6.1.- 2.1.1.-]
104290615  NUDT2; bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] [KO:K01518] [EC:3.6.1.17]
104286117  CTPS2; CTP synthase 2 [KO:K01937] [EC:6.3.4.2]
104293511  CTPS1; CTP synthase 1 [KO:K01937] [EC:6.3.4.2]
104292874  UCK1; uridine-cytidine kinase 1 [KO:K00876] [EC:2.7.1.48]
104293415  UCK2; LOW QUALITY PROTEIN: uridine-cytidine kinase 2 [KO:K00876] [EC:2.7.1.48]
104293885  UCKL1; uridine-cytidine kinase-like 1 [KO:K00876] [EC:2.7.1.48]
104295955  uridine-cytidine kinase-like 1 [KO:K00876] [EC:2.7.1.48]
104292584  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
104283372  NT5C2; cytosolic purine 5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
104290150  NT5M; 5'(3')-deoxyribonucleotidase, mitochondrial [KO:K01081] [EC:3.1.3.5]
104281925  NT5C; 5'(3')-deoxyribonucleotidase, cytosolic type [KO:K01081] [EC:3.1.3.5]
104282137  cytosolic purine 5'-nucleotidase-like [KO:K01081] [EC:3.1.3.5]
104284430  NT5C1A; cytosolic 5'-nucleotidase 1A [KO:K01081] [EC:3.1.3.5]
104286728  cytosolic 5'-nucleotidase 1B-like [KO:K01081] [EC:3.1.3.5]
104288685  NT5E; LOW QUALITY PROTEIN: 5'-nucleotidase [KO:K19970] [EC:3.1.3.5]
104285335  UPP1; uridine phosphorylase 1 isoform X1 [KO:K00757] [EC:2.4.2.3]
104286833  UPP2; uridine phosphorylase 2 [KO:K00757] [EC:2.4.2.3]
104288576  pseudouridine-metabolizing bifunctional protein C1861.05-like [KO:K16330] [EC:4.2.1.70 2.7.1.83]
104287485  NT5C3A; cytosolic 5'-nucleotidase 3A isoform X1 [KO:K24242] [EC:3.1.3.91]
104294780  NT5C3B; 7-methylguanosine phosphate-specific 5'-nucleotidase [KO:K24242] [EC:3.1.3.91]
104290819  CDA; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
104291581  RRM1; ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
104292429  RRM2B; ribonucleoside-diphosphate reductase subunit M2 B [KO:K10808] [EC:1.17.4.1]
104293736  RRM2; ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
104282106  HDDC2; HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
104287766  DCK; deoxycytidine kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
104293144  deoxycytidine kinase-like [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
104292412  DCTD; deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
104287470  DUT; deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial [KO:K01520] [EC:3.6.1.23]
104283142  TK1; thymidine kinase, cytosolic [KO:K00857] [EC:2.7.1.21]
104283217  TK2; thymidine kinase 2, mitochondrial [KO:K00857] [EC:2.7.1.21]
104287913  TYMS; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
104286331  DPYD; dihydropyrimidine dehydrogenase [NADP(+)] [KO:K00207] [EC:1.3.1.2]
104292421  DPYS; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
104293702  UPB1; beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
cvf00030  Pentose phosphate pathway
cvf00220  Arginine biosynthesis
cvf00250  Alanine, aspartate and glutamate metabolism
cvf00280  Valine, leucine and isoleucine degradation
cvf00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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