KEGG   PATHWAY: dcc00240
Entry
dcc00240                    Pathway                                
Name
Pyrimidine metabolism - Dermochelys coriacea (leatherback sea turtle)
Class
Metabolism; Nucleotide metabolism
Pathway map
dcc00240  Pyrimidine metabolism
dcc00240

Module
dcc_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:dcc00240]
dcc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dcc00240]
dcc_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dcc00240]
dcc_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:dcc00240]
Other DBs
GO: 0006220 0006213
Organism
Dermochelys coriacea (leatherback sea turtle) [GN:dcc]
Gene
119841142  DHODH; dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1 [KO:K00254] [EC:1.3.5.2]
119863768  UMPS; uridine 5'-monophosphate synthase isoform X1 [KO:K13421] [EC:2.4.2.10 4.1.1.23]
119860486  CMPK1; UMP-CMP kinase isoform X2 [KO:K13800] [EC:2.7.4.14]
119853850  CMPK2; LOW QUALITY PROTEIN: UMP-CMP kinase 2, mitochondrial [KO:K13809] [EC:2.7.4.14]
119847396  NME7; nucleoside diphosphate kinase 7 isoform X5 [KO:K00940] [EC:2.7.4.6]
119862510  NME4; nucleoside diphosphate kinase, mitochondrial [KO:K00940] [EC:2.7.4.6]
119842713  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
119842715  nucleoside diphosphate kinase A [KO:K00940] [EC:2.7.4.6]
119862970  NME3; nucleoside diphosphate kinase 3 isoform X2 [KO:K00940] [EC:2.7.4.6]
119860252  NME6; nucleoside diphosphate kinase 6 isoform X1 [KO:K00940] [EC:2.7.4.6]
119852635  AK9; adenylate kinase 9 isoform X2 [KO:K18533] [EC:2.7.4.3 2.7.4.6]
119844042  ectonucleoside triphosphate diphosphohydrolase 8-like [KO:K01510] [EC:3.6.1.5]
119844043  ectonucleoside triphosphate diphosphohydrolase 8-like isoform X1 [KO:K01510] [EC:3.6.1.5]
119844047  ENTPD8; ectonucleoside triphosphate diphosphohydrolase 8 [KO:K01510] [EC:3.6.1.5]
119852037  ENTPD3; ectonucleoside triphosphate diphosphohydrolase 3 [KO:K01510] [EC:3.6.1.5]
119858201  ENTPD1; ectonucleoside triphosphate diphosphohydrolase 1 isoform X1 [KO:K01510] [EC:3.6.1.5]
119843242  CANT1; soluble calcium-activated nucleotidase 1 isoform X1 [KO:K12304] [EC:3.6.1.6]
119848824  ENTPD4; ectonucleoside triphosphate diphosphohydrolase 4 isoform X1 [KO:K12305] [EC:3.6.1.6]
119857460  ENTPD5; LOW QUALITY PROTEIN: ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
119852814  ENPP3; ectonucleotide pyrophosphatase/phosphodiesterase family member 3 isoform X1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
119852908  ENPP1; ectonucleotide pyrophosphatase/phosphodiesterase family member 1 isoform X1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
119855639  ASMTL; probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein isoform X2 [KO:K25435] [EC:3.6.1.- 2.1.1.-]
119856150  NUDT2; bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] isoform X2 [KO:K01518] [EC:3.6.1.17]
119850805  CTPS2; CTP synthase 2 isoform X3 [KO:K01937] [EC:6.3.4.2]
119845293  CTPS1; CTP synthase 1 [KO:K01937] [EC:6.3.4.2]
119841770  UCKL1; uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
119844180  UCK1; uridine-cytidine kinase 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
119859741  UCK2; uridine-cytidine kinase 2 [KO:K00876] [EC:2.7.1.48]
119842864  NT5C; 5'(3')-deoxyribonucleotidase, cytosolic type [KO:K01081] [EC:3.1.3.5]
119858043  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
119845444  NT5C1A; cytosolic 5'-nucleotidase 1A isoform X1 [KO:K01081] [EC:3.1.3.5]
119858541  NT5C2; cytosolic purine 5'-nucleotidase isoform X1 [KO:K01081] [EC:3.1.3.5]
119852645  LOW QUALITY PROTEIN: cytosolic 5'-nucleotidase 1B-like [KO:K01081] [EC:3.1.3.5]
119855733  LOW QUALITY PROTEIN: trifunctional nucleotide phosphoesterase protein YfkN-like [KO:K01081] [EC:3.1.3.5]
119853556  NT5E; 5'-nucleotidase [KO:K19970] [EC:3.1.3.5]
119851698  UPP1; uridine phosphorylase 1 [KO:K00757] [EC:2.4.2.3]
119863502  UPP2; LOW QUALITY PROTEIN: uridine phosphorylase 2 [KO:K00757] [EC:2.4.2.3]
119843500  pseudouridine-metabolizing bifunctional protein C1861.05-like [KO:K16330] [EC:4.2.1.70 2.7.1.83]
119848907  NT5C3B; 7-methylguanosine phosphate-specific 5'-nucleotidase isoform X2 [KO:K24242] [EC:3.1.3.91]
119850468  NT5C3A; cytosolic 5'-nucleotidase 3A isoform X1 [KO:K24242] [EC:3.1.3.91]
119845043  CDA; cytidine deaminase isoform X1 [KO:K01489] [EC:3.5.4.5]
119844641  RRM1; ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
119851114  RRM2B; ribonucleoside-diphosphate reductase subunit M2 B isoform X4 [KO:K10808] [EC:1.17.4.1]
119853897  RRM2; ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
119856764  DCTPP1; dCTP pyrophosphatase 1 [KO:K16904] [EC:3.6.1.12]
119852865  HDDC2; 5'-deoxynucleotidase HDDC2 [KO:K07023] [EC:3.1.3.89]
119855251  DCK; deoxycytidine kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
119854680  DCTD; deoxycytidylate deaminase isoform X2 [KO:K01493] [EC:3.5.4.12]
119861725  DTYMK; thymidylate kinase isoform X4 [KO:K00943] [EC:2.7.4.9]
119862348  DUT; deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X2 [KO:K01520] [EC:3.6.1.23]
119851457  thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
119841183  TK2; thymidine kinase 2, mitochondrial isoform X2 [KO:K00857] [EC:2.7.1.21]
119843405  TK1; LOW QUALITY PROTEIN: thymidine kinase, cytosolic [KO:K00857] [EC:2.7.1.21]
119851043  TYMS; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
119860746  DPYD; dihydropyrimidine dehydrogenase [NADP(+)] isoform X1 [KO:K00207] [EC:1.3.1.2]
119851955  DPYS; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
119843532  UPB1; beta-ureidopropionase isoform X1 [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
dcc00030  Pentose phosphate pathway
dcc00220  Arginine biosynthesis
dcc00250  Alanine, aspartate and glutamate metabolism
dcc00280  Valine, leucine and isoleucine degradation
dcc00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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