KEGG   PATHWAY: gdi00230
Entry
gdi00230                    Pathway                                
Name
Purine metabolism - Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Class
Metabolism; Nucleotide metabolism
Pathway map
gdi00230  Purine metabolism
gdi00230

Module
gdi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:gdi00230]
gdi_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gdi00230]
gdi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gdi00230]
gdi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gdi00230]
gdi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gdi00230]
gdi_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:gdi00230]
gdi_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:gdi00230]
Other DBs
GO: 0006163 0042278
Organism
Gluconacetobacter diazotrophicus PA1 5 (Brazil) [GN:gdi]
Gene
GDI2517  Nucleoside diphosphate hydrolase [KO:K18447] [EC:3.6.1.21]
GDI3137  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
GDI0933  prs; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
GDI3505  purF; Aidophosphoribosyltransferase precursor [KO:K00764] [EC:2.4.2.14]
GDI3520  garS; putative phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
GDI2013  putative trifunctional purine biosynthetic protein adenosine-3 [KO:K11175] [EC:2.1.2.2]
GDI1960  purL; Phosphoribosylformylglycinamidine synthase II [KO:K23269] [EC:6.3.5.3]
GDI1957  purS; putative phosphoribosylformylglycinamidine synthase [KO:K23264] [EC:6.3.5.3]
GDI1959  purQ; Phosphoribosylformylglycinamidine synthase I [KO:K23265] [EC:6.3.5.3 3.5.1.2]
GDI2012  purM; putative phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
GDI1724  purK; putative phosphoribosylaminoimidazole carboxylase ATPase subunit [KO:K01589] [EC:6.3.4.18]
GDI1725  purE; putative phosphoribosylaminoimidazole carboxylase catalytic subunit [KO:K01588] [EC:5.4.99.18]
GDI1956  purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
GDI1954  purB; ptative adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
GDI1183  purH; Bifunctional purine biosynthesis protein purH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
GDI1344  apt; putative adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
GDI1984  surE; putative 5'-nucleotidase surE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
GDI0931  conserved hypothetical protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
GDI1811  guaB; Inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
GDI2014  ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
GDI1377  putative HAM1 protein homolog [KO:K01519] [EC:3.6.1.66]
GDI3218  gpt; Xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
GDI2003  xdhA; putative xanthine dehydrogenase, xdhA [KO:K13481] [EC:1.17.1.4]
GDI2002  xdhB; putative xanthine dehydrogenase/oxidase [KO:K13482] [EC:1.17.1.4]
GDI3147  guaA; gmp synthase [glutamine-hydrolyzing] (glutamin amidotransferase) (gmp synthetase) [KO:K01951] [EC:6.3.5.2]
GDI3167  guaD; putative guanine deaminase [KO:K01487] [EC:3.5.4.3]
GDI1132  Guanylate kinase [KO:K00942] [EC:2.7.4.8]
GDI1823  nrdA; Ribonucleoside-diphosphate reductase large subunit [KO:K00525] [EC:1.17.4.1]
GDI0910  putative vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
GDI1824  nrdB; putative ribonucleotide reductase small subunit [KO:K00526] [EC:1.17.4.1]
GDI2226  Deoxyguanosinetriphosphate triphosphohydrolase-like protein [KO:K01129] [EC:3.1.5.1]
GDI2156  spoT; putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
GDI1866  ppx; Exopolyphosphatase protein [KO:K01524] [EC:3.6.1.11 3.6.1.40]
GDI2009  gppA; putative guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
GDI2962  putative adenylate cyclase [KO:K01768] [EC:4.6.1.1]
GDI2255  purA; Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
GDI0783  add; putative adenosine deaminase [KO:K01488] [EC:3.5.4.4]
GDI0519  putative AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
GDI2526  Adenine deaminase [KO:K01486] [EC:3.5.4.2]
GDI0517  putative phosphoesterase [KO:K09769] [EC:3.1.4.16]
GDI3383  adk; Adenylate kinase [KO:K00939] [EC:2.7.4.3]
GDI2259  mazG; putative protein mazG [KO:K04765] [EC:3.6.1.9]
GDI1164  conserved hypothetical protein [KO:K03651] [EC:3.1.4.53]
GDI3237  putative sulfate adenylyltransferase subunit 1 [KO:K00955] [EC:2.7.7.4 2.7.1.25]
GDI3236  cysD; putative sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
GDI1999  conserved hypothetical protein [KO:K22879] [EC:1.14.13.113]
GDI1992  conserved hypothetical protein [KO:K13485] [EC:4.1.1.97]
GDI1993  putative polysaccharide deacetylase [KO:K16842] [EC:3.5.2.5]
GDI1995  N-carbamoyl-L-amino acid hydrolase [KO:K02083] [EC:3.5.3.9]
GDI1994  putative serine-pyruvate aminotransferase [KO:K00839] [EC:2.6.1.112]
GDI2701  putative serine-pyruvate aminotransferase [KO:K00839] [EC:2.6.1.112]
GDI1996  ggt; putative gamma-glutamyltranspeptidase precursor [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
gdi00030  Pentose phosphate pathway
gdi00220  Arginine biosynthesis
gdi00250  Alanine, aspartate and glutamate metabolism
gdi00260  Glycine, serine and threonine metabolism
gdi00340  Histidine metabolism
gdi00630  Glyoxylate and dicarboxylate metabolism
gdi00730  Thiamine metabolism
gdi00740  Riboflavin metabolism
gdi00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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