KEGG PATHWAY: gfr04216

PATHWAY: gfr04216

Entry

gfr04216                    Pathway

Name

Ferroptosis - Geospiza fortis (medium ground-finch)

Description

Ferroptosis is a regulated form of cell death and characterized by a production of reactive oxygen species (ROS) from accumulated iron and lipid peroxidation. It can be induced by experimental compounds (e.g.,erastin, RSL3) or clinical drugs(e.g., sulfasalazine, sorafenib) in cancer cell and certain normal cells. It is involved in multiple physiological and pathological processes, such as cancer cell death, neurodegenerative disease, tissue damage and acute renal failure.

Class

Cellular Processes; Cell growth and death

Pathway map

gfr04216

Ferroptosis

Other DBs

GO:

0097707

Organism

Geospiza fortis (medium ground-finch) [GN:gfr]

Gene

102034129

cystine/glutamate transporter-like [KO:K13869]

102042265

SLC7A11; solute carrier family 7 member 11 [KO:K13869]

102035643

GCLC; glutamate-cysteine ligase catalytic subunit [KO:K11204] [EC:6.3.2.2]

102038019

GSS; glutathione synthetase [KO:K21456] [EC:6.3.2.3]

102045367

GPX4; glutathione peroxidase 4 [KO:K05361] [EC:1.11.1.12]

102033249

ACSL5; acyl-CoA synthetase long-chain family member 5 [KO:K01897] [EC:6.2.1.3]

102035319

ACSL1; acyl-CoA synthetase long-chain family member 1 [KO:K01897] [EC:6.2.1.3]

102041385

ACSL4; acyl-CoA synthetase long-chain family member 4 [KO:K01897] [EC:6.2.1.3]

102037766

ACSL6; acyl-CoA synthetase long-chain family member 6 [KO:K01897] [EC:6.2.1.3]

102037784

ACSL3; acyl-CoA synthetase long-chain family member 3 [KO:K01897] [EC:6.2.1.3]

102041216

LPCAT3; lysophosphatidylcholine acyltransferase 3 [KO:K13515] [EC:2.3.1.23 2.3.1.-]

102034901

SAT1; spermidine/spermine N1-acetyltransferase 1 [KO:K00657] [EC:2.3.1.57]

102033474

diamine acetyltransferase 1-like [KO:K00657] [EC:2.3.1.57]

102034411

TF; transferrin [KO:K14736]

102041725

TFRC; transferrin receptor [KO:K06503]

102043446

STEAP3; STEAP3 metalloreductase [KO:K10142] [EC:1.16.1.-]

102034086

natural resistance-associated macrophage protein 2-like [KO:K21398]

102036794

SLC39A8; solute carrier family 39 member 8 [KO:K14714]

102039907

SLC39A14; solute carrier family 39 member 14 [KO:K14720]

102045110

PCBP2; poly(rC) binding protein 2 [KO:K13162]

102036400

SLC40A1; solute carrier family 40 member 1 [KO:K14685]

102036461

CP; ceruloplasmin [KO:K13624] [EC:1.16.3.1]

102040223

FTH1; ferritin heavy chain 1 [KO:K00522] [EC:1.16.3.1]

102037259

MAP1LC3C; microtubule associated protein 1 light chain 3 gamma [KO:K10435]

102034522

MAP1LC3B; microtubule associated protein 1 light chain 3 beta [KO:K10435]

102044371

MAP1LC3A; microtubule-associated proteins 1A/1B light chain 3A [KO:K10435]

102040398

ATG5; autophagy related 5 [KO:K08339]

102035766

ATG7; autophagy related 7 [KO:K08337]

102045382

NCOA4; nuclear receptor coactivator 4 [KO:K09289]

102043181

HMOX1; heme oxygenase 1 [KO:K00510] [EC:1.14.14.18]

102038775

VDAC2; voltage dependent anion channel 2 [KO:K15040]

102034080

VDAC3; voltage dependent anion channel 3 [KO:K15041]

102043904

cytochrome b-245 heavy chain [KO:K21421] [EC:1.-.-.-]

Compound

C00010

CoA

C00024

Acetyl-CoA

C00025

L-Glutamate

C00027

Hydrogen peroxide

C00032

Heme

C00051

Glutathione

C00097

L-Cysteine

C00127

Glutathione disulfide

C00129

Isopentenyl diphosphate

C00219

Arachidonate

C00356

(S)-3-Hydroxy-3-methylglutaryl-CoA

C00418

(R)-Mevalonate

C00491

L-Cystine

C00669

gamma-L-Glutamyl-L-cysteine

C02249

Arachidonyl-CoA

C02477

alpha-Tocopherol

C11378

Ubiquinone-10

C14818

Fe2+

C14819

Fe3+

C16170

(7Z,10Z,13Z,16Z)-Docosatetraenoyl-CoA

C16527

Adrenic acid

C16844

Hydroxyl radical

C21478

Erastin

C21479

RSL3

C21480

1-Octadecanoyl-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycero-3-phosphoethanolamine

C21481

1-Octadecanoyl-2-(7Z,10Z,13Z,16Z-docosatetraenoyl)-sn-glycero-3-phosphoethanolamine

C21482

1-Octadecanoyl-2-(15S-hydroxy-5Z,8Z,11Z,13E-eicosatetraenoyl)-sn-glycero-3-phosphoethanolamine

C21483

1-Octadecanoyl-2-(15S-hydroperoxy-5Z,8Z,11Z,13E-eicosatetraenoyl)-sn-glycero-3-phosphoethanolamine

C21484

1-Octadecanoyl-sn-glycero-3-phosphoethanolamine

D00448

Sulfasalazine (USP/INN)

D08524

Sorafenib (USAN/INN)

Reference

PMID:26775689

Authors

Conrad M, Angeli JP, Vandenabeele P, Stockwell BR

Title

Regulated necrosis: disease relevance and therapeutic opportunities.

Journal

Nat Rev Drug Discov 15:348-66 (2016)
DOI:10.1038/nrd.2015.6

Reference

PMID:26653790

Authors

Yang WS, Stockwell BR

Title

Ferroptosis: Death by Lipid Peroxidation.

Journal

Trends Cell Biol 26:165-76 (2016)
DOI:10.1016/j.tcb.2015.10.014

Reference

PMID:27842066

Authors

Kagan VE, Mao G, Qu F, Angeli JP, Doll S, Croix CS, Dar HH, Liu B, Tyurin VA, Ritov VB, Kapralov AA, Amoscato AA, Jiang J, Anthonymuthu T, Mohammadyani D, Yang Q, Proneth B, Klein-Seetharaman J, Watkins S, Bahar I, Greenberger J, Mallampalli RK, Stockwell BR, Tyurina YY, Conrad M, Bayir H

Title

Oxidized arachidonic and adrenic PEs navigate cells to ferroptosis.

Journal

Nat Chem Biol 13:81-90 (2017)
DOI:10.1038/nchembio.2238

Reference

PMID:27842067

Authors

D'Herde K, Krysko DV

Title

Ferroptosis: Oxidized PEs trigger death.

Journal

Nat Chem Biol 13:4-5 (2017)
DOI:10.1038/nchembio.2261

Reference

PMID:28082232

Authors

Guiney SJ, Adlard PA, Bush AI, Finkelstein DI, Ayton S

Title

Ferroptosis and cell death mechanisms in Parkinson's disease.

Journal

Neurochem Int 104:34-48 (2017)
DOI:10.1016/j.neuint.2017.01.004

Reference

PMID:26725301

Authors

Bogdan AR, Miyazawa M, Hashimoto K, Tsuji Y

Title

Regulators of Iron Homeostasis: New Players in Metabolism, Cell Death, and Disease.

Journal

Trends Biochem Sci 41:274-86 (2016)
DOI:10.1016/j.tibs.2015.11.012

Reference

PMID:26794443

Authors

Xie Y, Hou W, Song X, Yu Y, Huang J, Sun X, Kang R, Tang D

Title

Ferroptosis: process and function.

Journal

Cell Death Differ 23:369-79 (2016)
DOI:10.1038/cdd.2015.158

Reference

PMID:27791175

Authors

Murphy ME

Title

Ironing out how p53 regulates ferroptosis.

Journal

Proc Natl Acad Sci U S A 113:12350-12352 (2016)
DOI:10.1073/pnas.1615159113

Reference

PMID:28129536

Authors

Muckenthaler MU, Rivella S, Hentze MW, Galy B

Title

A Red Carpet for Iron Metabolism.

Journal

Cell 168:344-361 (2017)
DOI:10.1016/j.cell.2016.12.034

Reference

PMID:27860262

Authors

Yu H, Guo P, Xie X, Wang Y, Chen G

Title

Ferroptosis, a new form of cell death, and its relationships with tumourous diseases.

Journal

J Cell Mol Med 21:648-657 (2017)
DOI:10.1111/jcmm.13008

Reference

PMID:27314071

Authors

Wang SJ, Ou Y, Jiang L, Gu W

Title

Ferroptosis: A missing puzzle piece in the p53 blueprint?

Journal

Mol Cell Oncol 3:e1046581 (2016)
DOI:10.1080/23723556.2015.1046581

Reference

PMID:27048822

Authors

Cao JY, Dixon SJ

Title

Mechanisms of ferroptosis.

Journal

Cell Mol Life Sci 73:2195-209 (2016)
DOI:10.1007/s00018-016-2194-1

Reference

PMID:26436293

Authors

Mancias JD, Pontano Vaites L, Nissim S, Biancur DE, Kim AJ, Wang X, Liu Y, Goessling W, Kimmelman AC, Harper JW

Title

Ferritinophagy via NCOA4 is required for erythropoiesis and is regulated by iron dependent HERC2-mediated proteolysis.

Journal

Elife 4:e10308 (2015)
DOI:10.7554/eLife.10308

Reference

PMID:28066232

Authors

Wang YQ, Chang SY, Wu Q, Gou YJ, Jia L, Cui YM, Yu P, Shi ZH, Wu WS, Gao G, Chang YZ

Title

The Protective Role of Mitochondrial Ferritin on Erastin-Induced Ferroptosis.

Journal

Front Aging Neurosci 8:308 (2016)
DOI:10.3389/fnagi.2016.00308

Reference

PMID:26405158

Authors

Kwon MY, Park E, Lee SJ, Chung SW

Title

Heme oxygenase-1 accelerates erastin-induced ferroptotic cell death.

Journal

Oncotarget 6:24393-403 (2015)
DOI:10.18632/oncotarget.5162

Reference

PMID:22632964

Authors

Reed JC, Pellecchia M

Title

Ironing out cell death mechanisms.

Journal

Cell 149:963-5 (2012)
DOI:10.1016/j.cell.2012.05.009

Related
pathway

gfr00480

Glutathione metabolism

gfr00900

Terpenoid backbone biosynthesis

KO pathway

ko04216

LinkDB

DBGET integrated database retrieval system