KEGG   PATHWAY: halx00630
Entry
halx00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Halorussus limi
Class
Metabolism; Carbohydrate metabolism
Pathway map
halx00630  Glyoxylate and dicarboxylate metabolism
halx00630

Module
halx_M00621  Glycine cleavage system [PATH:halx00630]
halx_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:halx00630]
Other DBs
GO: 0046487 0043648
Organism
Halorussus limi [GN:halx]
Gene
M0R89_08570  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
M0R89_08580  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
M0R89_11345  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
M0R89_13530  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
M0R89_14520  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
M0R89_17380  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
M0R89_06535  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
M0R89_06880  citrate synthase [KO:K01659] [EC:2.3.3.5]
M0R89_14495  thiolase family protein [KO:K00626] [EC:2.3.1.9]
M0R89_16945  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
M0R89_17155  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
M0R89_10970  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
M0R89_10935  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
M0R89_15740  VOC family protein [KO:K05606] [EC:5.1.99.1]
M0R89_18085  acyl dehydratase [KO:K14449] [EC:4.2.1.148]
M0R89_00760  acetyl-CoA carboxylase biotin carboxylase subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
M0R89_00795  acyl-CoA carboxylase subunit beta [KO:K19312] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
M0R89_00790  acc operon protein [KO:K22568] [EC:6.4.1.2 6.4.1.3]
M0R89_13250  cobalamin B12-binding domain-containing protein [KO:K01849] [EC:5.4.99.2]
M0R89_10865  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
M0R89_13540  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
M0R89_18075  methylaspartate mutase subunit E [KO:K19268] [EC:5.4.99.1]
M0R89_18070  glmS; methylaspartate mutase subunit S [KO:K01846] [EC:5.4.99.1]
M0R89_18080  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
M0R89_18065  CoA transferase [KO:K19280] [EC:2.8.3.26]
M0R89_18090  aldolase/citrate lyase family protein [KO:K19281] [EC:4.1.3.24]
M0R89_21245  aldolase/citrate lyase family protein [KO:K19282] [EC:4.1.3.24 3.1.2.30]
M0R89_01160  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
M0R89_02040  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
M0R89_17255  HAD hydrolase family protein [KO:K22223] [EC:3.1.3.18]
M0R89_17545  alanine--glyoxylate aminotransferase family protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
M0R89_12695  gltB; glutamate synthase large subunit [KO:K00284] [EC:1.4.7.1]
M0R89_05150  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
M0R89_01070  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
M0R89_01440  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
M0R89_01435  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
M0R89_01450  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
M0R89_09355  aminomethyltransferase family protein [KO:K00605] [EC:2.1.2.10]
M0R89_06785  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
M0R89_01445  gcvH; glycine cleavage system protein GcvH [KO:K02437]
M0R89_21240  DUF4147 domain-containing protein [KO:K11529] [EC:2.7.1.165]
M0R89_06745  class II aldolase/adducin family protein [KO:K01636] [EC:4.1.2.-]
M0R89_21375  isocitrate/isopropylmalate family dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
M0R89_21570  molybdopterin-dependent oxidoreductase [KO:K00123] [EC:1.17.1.9]
M0R89_14640  molybdopterin-dependent oxidoreductase [KO:K00123] [EC:1.17.1.9]
M0R89_14645  4Fe-4S dicluster domain-containing protein [KO:K00124]
M0R89_03550  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
halx00010  Glycolysis / Gluconeogenesis
halx00020  Citrate cycle (TCA cycle)
halx00030  Pentose phosphate pathway
halx00053  Ascorbate and aldarate metabolism
halx00071  Fatty acid degradation
halx00230  Purine metabolism
halx00250  Alanine, aspartate and glutamate metabolism
halx00260  Glycine, serine and threonine metabolism
halx00620  Pyruvate metabolism
halx00710  Carbon fixation by Calvin cycle
halx00750  Vitamin B6 metabolism
halx00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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