KEGG   PATHWAY: kor00230
Entry
kor00230                    Pathway                                
Name
Purine metabolism - Kosakonia oryzae
Class
Metabolism; Nucleotide metabolism
Pathway map
kor00230  Purine metabolism
kor00230

Module
kor_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:kor00230]
kor_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:kor00230]
kor_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:kor00230]
kor_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:kor00230]
kor_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:kor00230]
Other DBs
GO: 0006163 0042278
Organism
Kosakonia oryzae [GN:kor]
Gene
AWR26_03255  nudF; ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
AWR26_13030  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
AWR26_01775  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
AWR26_21470  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
AWR26_17680  pgm; alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
AWR26_11525  prs; ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
AWR26_07935  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
AWR26_25300  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
AWR26_06930  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
AWR26_10375  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
AWR26_06640  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
AWR26_06935  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
AWR26_18870  purK; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
AWR26_18865  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
AWR26_07050  purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
AWR26_15260  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
AWR26_25295  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
AWR26_19010  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
AWR26_18960  bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
AWR26_08540  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
AWR26_04780  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
AWR26_17745  HAD-IIA family hydrolase [KO:K02566] [EC:3.1.3.5]
AWR26_01765  yrfG; GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
AWR26_18975  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
AWR26_21465  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
AWR26_19590  ppnP; pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
AWR26_06470  pgeF; polyphenol oxidase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
AWR26_20845  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
AWR26_06860  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
AWR26_06795  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
AWR26_21415  yjjX; inosine/xanthosine triphosphatase [KO:K01529] [EC:3.6.1.73]
AWR26_03920  XTP/dITP diphosphatase [KO:K01519] [EC:3.6.1.66]
AWR26_20215  gpt; xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
AWR26_10955  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
AWR26_06865  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
AWR26_02910  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
AWR26_20960  GMP reductase [KO:K00364] [EC:1.7.1.7]
AWR26_16080  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
AWR26_00435  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
AWR26_05670  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
AWR26_08240  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
AWR26_05665  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
AWR26_08235  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
AWR26_22475  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
AWR26_20710  dgt; dGTPase [KO:K01129] [EC:3.1.5.1]
AWR26_08060  yfbR; 5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
AWR26_00425  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
AWR26_24275  gppA; guanosine-5'-triphosphate,3'-diphosphate diphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
AWR26_06920  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
AWR26_20345  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
AWR26_24160  cyaA; class I adenylate cyclase [KO:K05851] [EC:4.6.1.1]
AWR26_22875  purA; adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
AWR26_13975  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
AWR26_09450  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
AWR26_20405  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
AWR26_22695  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
AWR26_18985  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
AWR26_20340  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
AWR26_03265  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
AWR26_13235  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
AWR26_21895  phosphodiesterase [KO:K03651] [EC:3.1.4.53]
AWR26_21210  apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH [KO:K01525] [EC:3.6.1.41]
AWR26_04750  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
AWR26_04745  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
AWR26_04740  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
AWR26_16100  hpxO; FAD-dependent urate hydroxylase HpxO [KO:K16839] [EC:1.14.13.113]
AWR26_16085  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
AWR26_16090  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K16840] [EC:4.1.1.97]
AWR26_16065  hpxA; allantoin racemase [KO:K16841] [EC:5.1.99.3]
AWR26_16060  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
AWR26_15995  hpxK; allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
AWR26_16000  alanine--glyoxylate aminotransferase family protein [KO:K00839] [EC:2.6.1.112]
AWR26_16040  AtzE family amidohydrolase [KO:K22601] [EC:2.1.3.5]
AWR26_16030  hpxW; oxamate amidohydrolase [KO:K22602] [EC:3.5.1.126]
AWR26_22420  arcC; carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
kor00030  Pentose phosphate pathway
kor00220  Arginine biosynthesis
kor00250  Alanine, aspartate and glutamate metabolism
kor00260  Glycine, serine and threonine metabolism
kor00340  Histidine metabolism
kor00630  Glyoxylate and dicarboxylate metabolism
kor00730  Thiamine metabolism
kor00740  Riboflavin metabolism
kor00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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