KEGG   PATHWAY: mcep03082
Entry
mcep03082                   Pathway                                
Name
ATP-dependent chromatin remodeling - Mugil cephalus (flathead mullet)
Class
Genetic Information Processing; Chromosome
Pathway map
mcep03082  ATP-dependent chromatin remodeling
mcep03082

Organism
Mugil cephalus (flathead mullet) [GN:mcep]
Gene
125003810  smarca5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1 [KO:K11654] [EC:5.6.2.-]
125023837  baz1a; bromodomain adjacent to zinc finger domain protein 1A [KO:K11655]
125013381  baz1b; tyrosine-protein kinase BAZ1B [KO:K11658]
125006308  baz2a; bromodomain adjacent to zinc finger domain protein 2A [KO:K15224]
125005796  baz2ba; bromodomain adjacent to zinc finger domain protein 2B isoform X1 [KO:K26167]
125017676  bromodomain adjacent to zinc finger domain protein 2B isoform X1 [KO:K26167]
125020511  chrac1; chromatin accessibility complex protein 1 [KO:K11656]
125005767  pole3; DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
125021412  rsf1b.1; remodeling and spacing factor 1 [KO:K11657]
125013130  rsf1a; remodeling and spacing factor 1 isoform X1 [KO:K11657]
125003514  nucleosome-remodeling factor subunit BPTF-like isoform X1 [KO:K11728]
125023956  histone-binding protein RBBP4 [KO:K10752]
125019637  rbbp4; histone-binding protein RBBP4 [KO:K10752]
125005028  histone-binding protein RBBP7 isoform X1 [KO:K10752]
125021539  c15h17orf49; chromatin complexes subunit BAP18 isoform X1 [KO:K23406]
125014834  cat eye syndrome critical region protein 2 [KO:K25830]
125015722  chd3; chromodomain-helicase-DNA-binding protein 3 isoform X1 [KO:K11642] [EC:5.6.2.-]
125019555  chd4a; chromodomain-helicase-DNA-binding protein 4a isoform X1 [KO:K11643] [EC:5.6.2.-]
125016205  chd4b; chromodomain-helicase-DNA-binding protein 4 isoform X1 [KO:K11643] [EC:5.6.2.-]
125023804  probable histone deacetylase 1-B isoform X1 [KO:K06067] [EC:3.5.1.98]
125019848  probable histone deacetylase 1-B [KO:K06067] [EC:3.5.1.98]
124998792  histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
124996851  mbd2; methyl-CpG-binding domain protein 2 isoform X1 [KO:K11590]
125011435  mbd3a; methyl-CpG-binding domain protein 3A [KO:K11591]
125009259  mbd3b; methyl-CpG-binding domain protein 3b isoform X1 [KO:K11591]
125022481  mta3; metastasis-associated protein MTA3 isoform X1 [KO:K11660]
125023971  mta1; metastasis-associated protein MTA1 [KO:K11660]
125019168  mta2; metastasis-associated protein MTA2 [KO:K11660]
125019803  gatad2b; transcriptional repressor p66-beta [KO:K23194]
125009110  gatad2ab; GATA zinc finger domain containing 2Ab [KO:K23194]
125010754  transcriptional repressor p66 alpha-like isoform X1 [KO:K23194]
125008661  phf6; PHD finger protein 6 isoform X1 [KO:K23310]
124996185  cyclin-dependent kinase 2-associated protein 1 isoform X1 [KO:K26454]
125003999  cdk2ap2; cyclin-dependent kinase 2-associated protein 2 isoform X1 [KO:K26455]
125011960  smarca2; probable global transcription activator SNF2L2 [KO:K11647] [EC:5.6.2.-]
125003978  transcription activator BRG1 isoform X1 [KO:K11647] [EC:5.6.2.-]
124997563  smarca4a; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1 [KO:K11647] [EC:5.6.2.-]
125012727  smarcb1a; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A [KO:K11648]
124996510  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like [KO:K11648]
125019659  smarcc1b; SWI/SNF complex subunit SMARCC1b [KO:K11649]
125016072  smarcc1a; SWI/SNF complex subunit SMARCC1 isoform X1 [KO:K11649]
125006740  smarcc2; SWI/SNF complex subunit SMARCC2 isoform X1 [KO:K11649]
125022921  smarcd2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 [KO:K11650]
125006785  smarcd1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 [KO:K11650]
124995574  smarcd3b; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1 [KO:K11650]
125004726  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 [KO:K11651]
124997957  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 [KO:K11651]
125003914  actin, cytoplasmic 2 [KO:K05692]
124998080  actb2; actin, cytoplasmic 2 [KO:K05692]
125012801  actin, cytoplasmic 1-like [KO:K05692]
125012829  actin-like [KO:K05692]
125008991  actl6a; actin-like protein 6A [KO:K11340]
125013468  bcl7bb; B-cell CLL/lymphoma 7 protein family member B-B [KO:K25605]
124996838  bcl7a; B-cell CLL/lymphoma 7 protein family member A [KO:K25605]
125023738  calcium-responsive transactivator-like isoform X1 [KO:K15623]
125010414  ss18; protein SSXT isoform X1 [KO:K15623]
125023248  AT-rich interactive domain-containing protein 1B-like isoform X1 [KO:K11653]
124998861  arid1b; AT-rich interactive domain-containing protein 1B isoform X1 [KO:K11653]
125016571  arid1aa; AT-rich interactive domain-containing protein 1A [KO:K11653]
125019560  arid1ab; AT-rich interactive domain-containing protein 1A [KO:K11653]
125023322  zinc finger protein DPF3-like isoform X1 [KO:K22198]
124998996  dpf3; zinc finger protein DPF3 isoform X1 [KO:K22198]
125014038  dpf1; zinc finger protein neuro-d4 [KO:K22198]
125021019  dpf2; zinc finger protein ubi-d4 isoform X1 [KO:K13196]
125008424  zinc finger protein ubi-D4-like isoform X1 [KO:K13196]
124999999  arid2; AT-rich interactive domain-containing protein 2 isoform X1 [KO:K11765]
125006759  pbrm1l; polybromo 1, like isoform X1 [KO:K11757]
125007253  pbrm1; protein polybromo-1 isoform X1 [KO:K11757]
125005163  brd7; bromodomain-containing protein 7 isoform X1 [KO:K11723]
125005124  phf10; PHD finger protein 10 [KO:K22197]
125016501  brd9; bromodomain-containing protein 9 isoform X1 [KO:K22184]
125013917  bicra; BRD4-interacting chromatin-remodeling complex-associated protein isoform X1 [KO:K25612]
125022351  bicral; BRD4-interacting chromatin-remodeling complex-associated protein-like [KO:K25613]
124999103  ino80; chromatin-remodeling ATPase INO80 isoform X1 [KO:K11665] [EC:5.6.2.-]
125006065  ino80b; INO80 complex subunit B [KO:K11666]
125017087  ino80c; INO80 complex subunit C isoform X1 [KO:K11667]
125017773  INO80 complex subunit D [KO:K11668]
125016362  ino80e; INO80 complex subunit E isoform X1 [KO:K11669]
125016169  tfpT; TCF3 fusion partner [KO:K11670]
125021243  nfrkb; nuclear factor related to kappa-B-binding protein isoform X1 [KO:K11671]
125007138  mcrs1; microspherule protein 1 isoform X1 [KO:K11674]
125009443  uchl5; ubiquitin carboxyl-terminal hydrolase isozyme L5 [KO:K05610] [EC:3.4.19.12]
125006283  ruvbl1; RuvB-like 1 [KO:K04499] [EC:5.6.2.4]
125021810  ruvbl2; RuvB-like 2 [KO:K11338] [EC:5.6.2.3]
125015690  actr5; actin-related protein 5 [KO:K11672]
125018539  actr8; actin-related protein 8 [KO:K11673]
125023508  yy1a; transcriptional repressor protein YY1a [KO:K09201]
124998790  yy1b; transcriptional repressor protein YY1b isoform X1 [KO:K09201]
125022184  uncharacterized protein LOC125022184 [KO:K11661] [EC:5.6.2.-]
125009950  dmap1; DNA methyltransferase 1-associated protein 1 [KO:K11324]
124999672  yeats4; YEATS domain-containing protein 4 [KO:K11341]
125020455  vps72a; vacuolar protein sorting 72 homolog A [KO:K11664]
125019250  core histone macro-H2A.2 isoform X1 [KO:K11251]
125021118  histone H2AX [KO:K11251]
125021391  core histone macro-H2A.1 isoform X1 [KO:K11251]
125011798  histone H2A.V [KO:K11251]
125013123  histone H2A, sperm-like [KO:K11251]
125021556  histone H2A-like [KO:K11251]
125021557  histone H2A-like [KO:K11251]
125021558  histone H2A-like [KO:K11251]
125021593  histone H2A-like [KO:K11251]
125020772  histone H2A-like [KO:K11251]
125020789  histone H2A [KO:K11251]
125020936  histone H2A-like [KO:K11251]
125000023  histone H2A-like [KO:K11251]
125000024  histone H2A-like [KO:K11251]
125002375  histone H2A-like [KO:K11251]
125002391  histone H2A-like [KO:K11251]
125002407  histone H2A-like [KO:K11251]
125003626  histone H2A-like [KO:K11251]
125003627  histone H2A-like [KO:K11251]
125003877  histone H2A-like [KO:K11251]
125005836  histone H2A.Z [KO:K11251]
125014923  actr6; actin-related protein 6 [KO:K11662]
125010130  znhit1; zinc finger HIT domain-containing protein 1 isoform X1 [KO:K11663]
125011871  ep400; E1A-binding protein p400 isoform X1 [KO:K11320] [EC:5.6.2.-]
125022217  transformation/transcription domain-associated protein isoform X1 [KO:K08874]
125005725  mortality factor 4-like protein 1 [KO:K11339]
125015526  morf4l1; mortality factor 4-like protein 1 isoform X1 [KO:K11339]
125009963  MRG/MORF4L-binding protein [KO:K11343]
125021065  brd8a; bromodomain-containing protein 8 isoform X1 [KO:K11321]
125008174  brd8b; bromodomain-containing protein 8 isoform X1 [KO:K11321]
125000012  ing3; inhibitor of growth protein 3 [KO:K11319]
124995580  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
125010702  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
125020573  meaf6; chromatin modification-related protein MEAF6 isoform X1 [KO:K11344]
125020815  histone acetyltransferase KAT5 isoform X1 [KO:K11304] [EC:2.3.1.48]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
LinkDB

DBGET integrated database retrieval system