KEGG   PATHWAY: npn00230
Entry
npn00230                    Pathway                                
Name
Purine metabolism - Novosphingobium pentaromativorans
Class
Metabolism; Nucleotide metabolism
Pathway map
npn00230  Purine metabolism
npn00230

Module
npn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:npn00230]
npn_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:npn00230]
npn_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:npn00230]
npn_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:npn00230]
npn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:npn00230]
Other DBs
GO: 0006163 0042278
Organism
Novosphingobium pentaromativorans [GN:npn]
Gene
JI59_18055  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
JI59_01490  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
JI59_04845  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
JI59_20135  phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
JI59_04990  phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
JI59_10455  phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
JI59_23525  phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
JI59_01325  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
JI59_11835  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
JI59_18140  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
JI59_00540  phosphoribosylformylglycinamidine synthase [KO:K23269] [EC:6.3.5.3]
JI59_18175  phosphoribosylformylglycinamidine synthase [KO:K23264] [EC:6.3.5.3]
JI59_18180  phosphoribosylformylglycinamidine synthase [KO:K23265] [EC:6.3.5.3 3.5.1.2]
JI59_18145  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
JI59_11240  phosphoribosylaminoimidazole carboxylase [KO:K01589] [EC:6.3.4.18]
JI59_11235  purE; N5-carboxyaminoimidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
JI59_18220  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
JI59_01480  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
JI59_10575  purH; phosphoribosylaminoimidazolecarboxamide formyltransferase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
JI59_10905  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
JI59_10010  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
JI59_24865  acid phosphatase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
JI59_16135  stationary phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
JI59_10925  polyphenol oxidase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
JI59_01270  inosine-5-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
JI59_18125  ndk; phosphodiesterase [KO:K00940] [EC:2.7.4.6]
JI59_03770  nucleoside-triphosphate diphosphatase [KO:K01519] [EC:3.6.1.66]
JI59_09970  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
JI59_14930  guanylate kinase [KO:K00942] [EC:2.7.4.8]
JI59_12855  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
JI59_12875  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
JI59_02595  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
JI59_15075  GTP pyrophosphokinase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
JI59_12290  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
JI59_14235  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
JI59_13945  guanylate cyclase [KO:K01768] [EC:4.6.1.1]
JI59_12400  adenylate cyclase [KO:K01768] [EC:4.6.1.1]
JI59_20685  adenylate cyclase [KO:K01768] [EC:4.6.1.1]
JI59_17065  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
JI59_18915  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
JI59_15460  adenylate kinase [KO:K00939] [EC:2.7.4.3]
JI59_03570  mazG; nucleoside triphosphate hydrolase [KO:K04765] [EC:3.6.1.9]
JI59_13905  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
JI59_02215  adenylyltransferase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
JI59_02210  sulfate adenylyltransferase [KO:K00957] [EC:2.7.7.4]
JI59_13860  monooxygenase [KO:K22879] [EC:1.14.13.113]
JI59_06010  monooxygenase [KO:K22879] [EC:1.14.13.113]
JI59_06005  5-hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
JI59_06015  OHCU decarboxylase [KO:K13485] [EC:4.1.1.97]
JI59_06025  chitin deacetylase [KO:K16842] [EC:3.5.2.5]
JI59_06030  aminotransferase V [KO:K00839] [EC:2.6.1.112]
JI59_20995  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
JI59_20990  ureB; urease subunit beta [KO:K01429] [EC:3.5.1.5]
JI59_20985  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
JI59_05915  gamma-glutamyltransferase [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
npn00030  Pentose phosphate pathway
npn00220  Arginine biosynthesis
npn00250  Alanine, aspartate and glutamate metabolism
npn00260  Glycine, serine and threonine metabolism
npn00340  Histidine metabolism
npn00630  Glyoxylate and dicarboxylate metabolism
npn00730  Thiamine metabolism
npn00740  Riboflavin metabolism
npn00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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