KEGG   PATHWAY: ogl03022
Entry
ogl03022                    Pathway                                
Name
Basal transcription factors - Oryza glaberrima (African rice)
Class
Genetic Information Processing; Transcription
Pathway map
ogl03022  Basal transcription factors
ogl03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Oryza glaberrima (African rice) [GN:ogl]
Gene
127774522  uncharacterized protein LOC127774522 [KO:K03122]
127774084  transcription initiation factor IIA subunit 2 [KO:K03123]
127759196  transcription initiation factor IIA subunit 2-like [KO:K03123]
127784396  transcription initiation factor IIB [KO:K03124]
127775187  transcription initiation factor IIB-like [KO:K03124]
127765325  plant-specific TFIIB-related protein 1 [KO:K03124]
127778400  transcription initiation factor IIB-like [KO:K03124]
127778504  transcription initiation factor IIB-like [KO:K03124]
127768978  transcription initiation factor IIB-like [KO:K03124]
127766805  TATA-binding protein 2 [KO:K03120]
127758234  TATA-binding protein 2-like [KO:K03120]
127753445  TATA-binding protein 2-like [KO:K03120]
127775554  transcription initiation factor TFIID subunit 1 isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
127784887  transcription initiation factor TFIID subunit 2 [KO:K03128]
127773436  transcription initiation factor TFIID subunit 7-like [KO:K03132]
127761799  transcription initiation factor TFIID subunit 8-like [KO:K14649]
127767785  transcription initiation factor TFIID subunit 8-like [KO:K14649]
127785439  transcription initiation factor TFIID subunit 10 [KO:K03134]
127776729  transcription initiation factor TFIID subunit 5 [KO:K03130]
127778812  transcription initiation factor TFIID subunit 5-like [KO:K03130]
127761201  transcription initiation factor TFIID subunit 4b-like [KO:K03129]
127766469  transcription initiation factor TFIID subunit 4b [KO:K03129]
127773640  transcription initiation factor TFIID subunit 12 [KO:K03126]
127774047  transcription initiation factor TFIID subunit 12b isoform X1 [KO:K03126]
127778332  transcription initiation factor TFIID subunit 6-like [KO:K03131]
127768370  transcription initiation factor TFIID subunit 9 [KO:K03133]
127786396  transcription initiation factor TFIID subunit 11 [KO:K03135]
127760788  transcription initiation factor TFIID subunit 13 [KO:K03127]
127782442  uncharacterized protein LOC127782442 isoform X1 [KO:K03136]
127754599  uncharacterized protein LOC127754599 [KO:K03136]
127768194  uncharacterized protein LOC127768194 [KO:K03137]
127752855  uncharacterized protein LOC127752855 [KO:K03137]
127752616  transcription initiation factor IIF subunit alpha isoform X1 [KO:K03138]
127772882  uncharacterized protein LOC127772882 [KO:K03139] [EC:5.6.2.-]
127760612  transcription initiation factor IIF subunit beta isoform X1 [KO:K03139] [EC:5.6.2.-]
127782462  general transcription and DNA repair factor IIH subunit TFB1-1-like [KO:K03141]
127772192  general transcription factor IIH subunit 2 [KO:K03142]
127761941  general transcription and DNA repair factor IIH subunit TFB4 [KO:K03143]
127772063  general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [KO:K03144]
127767450  general transcription and DNA repair factor IIH helicase subunit XPB1-like [KO:K10843] [EC:5.6.2.4]
127772522  general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
127778796  general transcription and DNA repair factor IIH subunit TFB5 [KO:K10845]
127774034  cyclin-dependent kinase D-1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
127776183  uncharacterized protein LOC127776183 [KO:K10842]
127754823  uncharacterized protein LOC127754823 [KO:K10842]
127765037  cyclin-H1-1 [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
ogl03020  RNA polymerase
ogl03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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