KEGG   PATHWAY: pcad04940
Entry
pcad04940                   Pathway                                
Name
Type I diabetes mellitus - Physeter catodon (sperm whale)
Description
Type I diabetes mellitus is a disease that results from autoimmune destruction of the insulin-producing beta-cells. Certain beta-cell proteins act as autoantigens after being processed by antigen-presenting cell (APC), such as macrophages and dendritic cells, and presented in a complex with MHC-II molecules on the surface of the APC. Then immunogenic signals from APC activate CD4+ T cells, predominantly of the Th1 subset. Antigen-activated Th1 cells produce IL-2 and IFNgamma. They activate macrophages and cytotoxic CD8+ T cells, and these effector cells may kill islet beta-cells by one or both of two types of mechanisms: (1) direct interactions of antigen-specific cytotoxic T cells with a beta-cell autoantigen-MHC-I complex on the beta-cell, and (2) non-specific inflammatory mediators, such as free radicals/oxidants and cytokines (IL-1, TNFalpha, TNFbeta, IFNgamma).
Type I diabetes is a polygenic disease. One of the principle determining genetic factors in diabetes incidence is the inheritance of mutant MHC-II alleles. Another plausible candidate gene is the insulin gene.
Class
Human Diseases; Endocrine and metabolic disease
Pathway map
pcad04940  Type I diabetes mellitus
pcad04940

Organism
Physeter catodon (sperm whale) [GN:pcad]
Gene
112062628  INS; insulin [KO:K04526]
102995985  GAD1; glutamate decarboxylase 1 isoform X1 [KO:K01580] [EC:4.1.1.15]
102988357  GAD2; glutamate decarboxylase 2 [KO:K01580] [EC:4.1.1.15]
102981350  PTPRN; receptor-type tyrosine-protein phosphatase-like N isoform X1 [KO:K07817] [EC:3.1.3.48]
102993489  PTPRN2; LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase N2 [KO:K07817] [EC:3.1.3.48]
102974139  CPE; carboxypeptidase E [KO:K01294] [EC:3.4.17.10]
102975361  HSPD1; 60 kDa heat shock protein, mitochondrial isoform X1 [KO:K04077] [EC:5.6.1.7]
102990813  ICA1; islet cell autoantigen 1 isoform X1 [KO:K19863]
102994322  HLA class II histocompatibility antigen, DM alpha chain isoform X1 [KO:K06752]
102973944  HLA class II histocompatibility antigen, DR alpha chain [KO:K06752]
102976012  HLA class II histocompatibility antigen, DQ beta 1 chain isoform X2 [KO:K06752]
102973764  DLA class II histocompatibility antigen, DR-1 beta chain-like isoform X1 [KO:K06752]
102976287  HLA class II histocompatibility antigen, DQ alpha 2 chain isoform X2 [KO:K06752]
102992942  HLA class II histocompatibility antigen, DO alpha chain [KO:K06752]
102974479  HLA class II histocompatibility antigen, DO beta chain [KO:K06752]
102994605  HLA class II histocompatibility antigen, DM beta chain [KO:K06752]
102978546  DLA class II histocompatibility antigen, DR-1 beta chain [KO:K06752]
102975720  CD80; T-lymphocyte activation antigen CD80 isoform X2 [KO:K05412]
102978292  CD86; T-lymphocyte activation antigen CD86 [KO:K05413]
102974216  CD28; LOW QUALITY PROTEIN: T-cell-specific surface glycoprotein CD28 [KO:K06470]
102982335  IL12A; interleukin-12 subunit alpha [KO:K05406]
102980587  IL12B; interleukin-12 subunit beta [KO:K05425]
102990654  IL2; interleukin-2 [KO:K05429]
102981551  IFNG; interferon gamma [KO:K04687]
112064291  BOLA class I histocompatibility antigen, alpha chain BL3-7-like isoform X2 [KO:K06751]
112064292  BOLA class I histocompatibility antigen, alpha chain BL3-7-like [KO:K06751]
112064318  BOLA class I histocompatibility antigen, alpha chain BL3-6-like [KO:K06751]
102996245  LOW QUALITY PROTEIN: BOLA class I histocompatibility antigen, alpha chain BL3-7-like [KO:K06751]
102985933  H-2 class I histocompatibility antigen, Q10 alpha chain-like [KO:K06751]
102979864  FASLG; tumor necrosis factor ligand superfamily member 6 [KO:K04389]
102985097  FAS; tumor necrosis factor receptor superfamily member 6 isoform X1 [KO:K04390]
102992503  PRF1; perforin-1 [KO:K07818]
102996600  granzyme B isoform X1 [KO:K01353] [EC:3.4.21.79]
102996887  LOW QUALITY PROTEIN: mast cell protease 3-like [KO:K01353] [EC:3.4.21.79]
102983830  LTA; lymphotoxin-alpha [KO:K05468]
102983069  TNF; tumor necrosis factor [KO:K03156]
102993910  IL1A; interleukin-1 alpha [KO:K04383]
102994188  IL1B; interleukin-1 beta [KO:K04519]
Compound
C00027  Hydrogen peroxide
C00533  Nitric oxide
C00704  Superoxide
Reference
PMID:9719467
  Authors
Rabinovitch A, Suarez-Pinzon WL.
  Title
Cytokines and their roles in pancreatic islet beta-cell destruction and insulin-dependent diabetes mellitus.
  Journal
Biochem Pharmacol 55:1139-49 (1998)
DOI:10.1016/S0006-2952(97)00492-9
Reference
  Authors
Cox NJ, Wapelhorst B, Morrison VA, Johnson L, Pinchuk L, Spielman RS, Todd JA, Concannon P
  Title
Seven regions of the genome show evidence of linkage to type 1 diabetes in a consensus analysis of 767 multiplex families.
  Journal
Am J Hum Genet 69:820-30 (2001)
DOI:10.1086/323501
Reference
PMID:8072542
  Authors
Davies JL, Kawaguchi Y, Bennett ST, Copeman JB, Cordell HJ, Pritchard LE, Reed PW, Gough SC, Jenkins SC, Palmer SM, et al.
  Title
A genome-wide search for human type 1 diabetes susceptibility genes.
  Journal
Nature 371:130-6 (1994)
DOI:10.1038/371130a0
Reference
PMID:8786033
  Authors
Fujisawa T, Ikegami H, Kawaguchi Y, Yamato E, Takekawa K, Nakagawa Y, Hamada Y, Ueda H, Shima K, Ogihara T.
  Title
Class I HLA is associated with age-at-onset of IDDM, while class II HLA confers susceptibility to IDDM.
  Journal
Diabetologia 38:1493-5 (1995)
DOI:10.1007/BF00400620
Reference
  Authors
Jaeckel E, Klein L, Martin-Orozco N, von Boehmer H.
  Title
Normal incidence of diabetes in NOD mice tolerant to glutamic acid decarboxylase.
  Journal
J Exp Med 197:1635-44 (2003)
DOI:10.1084/jem.20030215
Reference
  Authors
Nakayama M, Abiru N, Moriyama H, Babaya N, Liu E, Miao D, Yu L, Wegmann DR, Hutton JC, Elliott JF, Eisenbarth GS.
  Title
Prime role for an insulin epitope in the development of type 1 diabetes in NOD mice.
  Journal
Nature 435:220-3 (2005)
DOI:10.1038/nature03523
Reference
  Authors
Kent SC, Chen Y, Bregoli L, Clemmings SM, Kenyon NS, Ricordi C, Hering BJ, Hafler DA.
  Title
Expanded T cells from pancreatic lymph nodes of type 1 diabetic subjects recognize an insulin epitope.
  Journal
Nature 435:224-8 (2005)
DOI:10.1038/nature03625
Reference
  Authors
Lieberman SM, DiLorenzo TP.
  Title
A comprehensive guide to antibody and T-cell responses in type 1 diabetes.
  Journal
Tissue Antigens 62:359-77 (2003)
DOI:10.1034/j.1399-0039.2003.00152.x
Reference
  Authors
Lord SJ, Rajotte RV, Korbutt GS, Bleackley RC.
  Title
Granzyme B: a natural born killer.
  Journal
Immunol Rev 193:31-8 (2003)
DOI:10.1034/j.1600-065X.2003.00044.x
Related
pathway
pcad04210  Apoptosis
pcad04660  T cell receptor signaling pathway
KO pathway
ko04940   
LinkDB

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