KEGG   PATHWAY: pcal00230
Entry
pcal00230                   Pathway                                
Name
Purine metabolism - Parageobacillus caldoxylosilyticus
Class
Metabolism; Nucleotide metabolism
Pathway map
pcal00230  Purine metabolism
pcal00230

Module
pcal_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pcal00230]
pcal_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pcal00230]
pcal_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pcal00230]
pcal_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pcal00230]
pcal_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pcal00230]
Other DBs
GO: 0006163 0042278
Organism
Parageobacillus caldoxylosilyticus [GN:pcal]
Gene
BV455_03087  nudF; ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
BV455_03093  deoB; Phosphopentomutase [KO:K01839] [EC:5.4.2.7]
BV455_01200  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
BV455_01387  algC; Phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
BV455_01728  prs; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
BV455_01460  purF; Amidophosphoribosyltransferase precursor [KO:K00764] [EC:2.4.2.14]
BV455_01456  purD; Phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
BV455_01458  purN; Phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
BV455_01461  purL; Phosphoribosylformylglycinamidine synthase 2 [KO:K23269] [EC:6.3.5.3]
BV455_01463  phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
BV455_01462  purQ; Phosphoribosylformylglycinamidine synthase 1 [KO:K23265] [EC:6.3.5.3 3.5.1.2]
BV455_01459  purM; Phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
BV455_01466  purK; N5-carboxyaminoimidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
BV455_01467  purE_1; N5-carboxyaminoimidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
BV455_01464  purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
BV455_01465  purB; Adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
BV455_01457  purH; Bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
BV455_02764  apt; Adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
BV455_03751  yhcR_2; Endonuclease YhcR precursor [KO:K01081] [EC:3.1.3.5]
BV455_02329  yfkN; Trifunctional nucleotide phosphoesterase protein YfkN precursor [KO:K01081] [EC:3.1.3.5]
BV455_04049  surE; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
BV455_03094  punA; Purine nucleoside phosphorylase 1 [KO:K03783] [EC:2.4.2.1]
BV455_00140  deoD; Purine nucleoside phosphorylase DeoD-type [KO:K03784] [EC:2.4.2.1]
BV455_00731  Laccase domain protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
BV455_01709  hpt; Hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
BV455_01771  guaB_1; Inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
BV455_03203  ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
BV455_02514  Non-canonical purine NTP phosphatase [KO:K01529] [EC:3.6.1.73]
BV455_02677  Non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
BV455_00175  xpt; Xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
BV455_03581  pucC; putative xanthine dehydrogenase subunit C [KO:K00087] [EC:1.17.1.4]
BV455_03582  pucD; putative xanthine dehydrogenase subunit D [KO:K00087] [EC:1.17.1.4]
BV455_03583  pucE; putative xanthine dehydrogenase subunit E [KO:K00087] [EC:1.17.1.4]
BV455_01362  cutM; Carbon monoxide dehydrogenase medium chain [KO:K00087] [EC:1.17.1.4]
BV455_01474  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
BV455_00705  gmk; Guanylate kinase [KO:K00942] [EC:2.7.4.8]
BV455_03000  nrdZ_1; Ribonucleoside-diphosphate reductase NrdZ [KO:K00525] [EC:1.17.4.1]
BV455_01154  nrdE; Ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
BV455_02563  nrdB_2; R2-like ligand binding oxidase [KO:K00526] [EC:1.17.4.1]
BV455_01155  nrdB_1; Ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
BV455_01764  dgk; Deoxyguanosine kinase [KO:K15518] [EC:2.7.1.113]
BV455_02765  relA; GTP pyrophosphokinase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
BV455_00971  yjbM; GTP pyrophosphokinase YjbM [KO:K07816] [EC:2.7.6.5]
BV455_01809  purA; Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
BV455_01765  dck; Deoxyadenosine/deoxycytidine kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
BV455_01453  yerA; Putative adenine deaminase YerA [KO:K01486] [EC:3.5.4.2]
BV455_00576  Calcineurin-like phosphoesterase [KO:K09769] [EC:3.1.4.16]
BV455_01631  adk; Adenylate kinase [KO:K00939] [EC:2.7.4.3]
BV455_01328  cysC; putative adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
BV455_01327  sat; Sulfate adenylyltransferase [KO:K00958] [EC:2.7.7.4]
BV455_03585  uao; Uric acid degradation bifunctional protein [KO:K16838] [EC:1.7.3.3 4.1.1.97]
BV455_03584  pucM; 5-hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
BV455_03592  allB_1; Allantoinase [KO:K01466] [EC:3.5.2.5]
BV455_02024  amaB_1; N-carbamoyl-L-amino acid hydrolase [KO:K02083] [EC:3.5.3.9]
BV455_03588  hyuC; Hydantoin utilization protein C [KO:K02083] [EC:3.5.3.9]
BV455_03601  ureC; Urease subunit alpha [KO:K01428] [EC:3.5.1.5]
BV455_03600  ureB; Urease subunit beta [KO:K01429] [EC:3.5.1.5]
BV455_03599  ureA; Urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pcal00030  Pentose phosphate pathway
pcal00220  Arginine biosynthesis
pcal00250  Alanine, aspartate and glutamate metabolism
pcal00260  Glycine, serine and threonine metabolism
pcal00340  Histidine metabolism
pcal00630  Glyoxylate and dicarboxylate metabolism
pcal00730  Thiamine metabolism
pcal00740  Riboflavin metabolism
pcal00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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