KEGG   PATHWAY: pret03440
Entry
pret03440                   Pathway                                
Name
Homologous recombination - Poecilia reticulata (guppy)
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
pret03440  Homologous recombination
pret03440

Other DBs
GO: 0000724
Organism
Poecilia reticulata (guppy) [GN:pret]
Gene
103459159  ssbp1; single-stranded DNA-binding protein, mitochondrial [KO:K03111]
103475378  rad50; DNA repair protein RAD50 isoform X2 [KO:K10866] [EC:3.6.-.-]
103474602  mre11a; double-strand break repair protein MRE11A [KO:K10865]
103478137  nbn; nibrin [KO:K10867]
103474390  atm; serine-protein kinase ATM isoform X1 [KO:K04728] [EC:2.7.11.1]
103481274  brca1; breast cancer type 1 susceptibility protein [KO:K10605] [EC:2.3.2.27]
103461621  bard1; BRCA1-associated RING domain protein 1 isoform X2 [KO:K10683]
103482301  rbbp8; DNA endonuclease RBBP8 isoform X1 [KO:K20773] [EC:3.1.-.-]
103474333  brip1; Fanconi anemia group J protein isoform X3 [KO:K15362] [EC:5.6.2.3]
103456816  topbp1; DNA topoisomerase 2-binding protein 1 [KO:K10728]
103473131  fam175a; BRCA1-A complex subunit Abraxas [KO:K20774]
103476392  uimc1; BRCA1-A complex subunit RAP80 isoform X1 [KO:K20775]
103463293  babam1; BRISC and BRCA1-A complex member 1 [KO:K20776]
103458681  bre; BRCA1-A complex subunit BRE [KO:K12173]
103473912  brcc3; lys-63-specific deubiquitinase BRCC36 [KO:K11864] [EC:3.4.19.-]
103462050  palb2; partner and localizer of BRCA2 [KO:K10897]
103474967  brca2; breast cancer type 2 susceptibility protein [KO:K08775]
103466778  sycp3; synaptonemal complex protein 3 [KO:K19528]
103475593  replication protein A 70 kDa DNA-binding subunit-like [KO:K07466]
103471966  replication protein A 32 kDa subunit-like isoform X1 [KO:K10739]
103477825  rpa2; replication protein A 32 kDa subunit [KO:K10739]
103471936  rpa3; replication protein A 14 kDa subunit [KO:K10740]
103457985  rad51; DNA repair protein RAD51 homolog 1 [KO:K04482]
103466058  rad52; DNA repair protein RAD52 homolog isoform X2 [KO:K10873]
103460233  rad51c; DNA repair protein RAD51 homolog 3 [KO:K10870]
103476284  rad51d; DNA repair protein RAD51 homolog 4 [KO:K10871]
103460164  xrcc2; DNA repair protein XRCC2 isoform X2 [KO:K10879]
103457060  xrcc3; DNA repair protein XRCC3 [KO:K10880]
103464195  rad54l; DNA repair and recombination protein RAD54-like isoform X1 [KO:K10875] [EC:5.6.2.-]
103478665  rad54b; DNA repair and recombination protein RAD54B [KO:K10877] [EC:5.6.2.-]
103469089  pold1; DNA polymerase delta catalytic subunit [KO:K02327] [EC:2.7.7.7]
103470590  pold2; DNA polymerase delta subunit 2 [KO:K02328]
103479481  pold3; DNA polymerase delta subunit 3 [KO:K03504]
103470987  pold4; DNA polymerase delta subunit 4 [KO:K03505]
103466620  blm; Bloom syndrome protein isoform X1 [KO:K10901] [EC:5.6.2.4]
103469628  top3b; DNA topoisomerase 3-beta-1 [KO:K03165] [EC:5.6.2.1]
103468466  top3a; DNA topoisomerase 3-alpha [KO:K03165] [EC:5.6.2.1]
103480598  mus81; crossover junction endonuclease MUS81 isoform X1 [KO:K08991] [EC:3.1.22.-]
103482091  crossover junction endonuclease EME1 [KO:K10882] [EC:3.1.22.-]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

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