KEGG   PATHWAY: psoj03013
Entry
psoj03013                   Pathway                                
Name
Nucleocytoplasmic transport - Phytophthora sojae
Description
The exchange of molecules between the nucleus and cytoplasm is mediated through nuclear pore complexes (NPCs) embedded in the nuclear envelope. The NPC is composed of highly conserved, distinct structural modules: the inner pore ring, the cytoplasmic and nuclear rings as well as the cytoplasmic filaments and the nuclear basket. Nuclear transport receptors (e.g. importins and exportins) mediate translocation of cargos through the NPC. Cargo proteins harbouring a nuclear export signal (NES) bind to exportins and Ran-GTP to form an export complex in the nucleoplasm. Nuclear export of bulk mRNA is provided by the non-karyopherin transport proteins TAP-p15 in a Ran-GTP-independent manner. Several EJC factors are known to function in mRNA export.
Class
Genetic Information Processing; Translation
Pathway map
psoj03013  Nucleocytoplasmic transport
psoj03013

Other DBs
GO: 0050658
Organism
Phytophthora sojae [GN:psoj]
Gene
PHYSODRAFT_554264  hypothetical protein [KO:K14320]
PHYSODRAFT_548480  hypothetical protein [KO:K18655] [EC:5.6.2.7]
PHYSODRAFT_360329  hypothetical protein [KO:K14298]
PHYSODRAFT_326004  hypothetical protein [KO:K14297]
PHYSODRAFT_511002  hypothetical protein [KO:K10577]
PHYSODRAFT_360727  hypothetical protein [KO:K14303]
PHYSODRAFT_559895  hypothetical protein [KO:K14304]
PHYSODRAFT_475312  vesicle coat complex COPII subunit SEC13 [KO:K14004]
PHYSODRAFT_311060  hypothetical protein [KO:K14301]
PHYSODRAFT_310044  hypothetical protein [KO:K14300]
PHYSODRAFT_350501  hypothetical protein [KO:K14299]
PHYSODRAFT_490699  hypothetical protein [KO:K14305]
PHYSODRAFT_327965  hypothetical protein [KO:K14306]
PHYSODRAFT_485826  hypothetical protein [KO:K14307]
PHYSODRAFT_541828  hypothetical protein [KO:K14310]
PHYSODRAFT_297338  hypothetical protein [KO:K14312]
PHYSODRAFT_302408  hypothetical protein [KO:K14309]
PHYSODRAFT_346173  hypothetical protein [KO:K14313]
PHYSODRAFT_529901  hypothetical protein [KO:K15042]
PHYSODRAFT_328562  hypothetical protein [KO:K15042]
PHYSODRAFT_350634  hypothetical protein [KO:K15042]
PHYSODRAFT_513162  hypothetical protein [KO:K15042]
PHYSODRAFT_354318  hypothetical protein [KO:K15042]
PHYSODRAFT_344537  hypothetical protein [KO:K14293]
PHYSODRAFT_566199  hypothetical protein [KO:K18752]
PHYSODRAFT_300058  hypothetical protein [KO:K15436]
PHYSODRAFT_359228  hypothetical protein [KO:K15436]
PHYSODRAFT_343761  hypothetical protein [KO:K15436]
PHYSODRAFT_471015  hypothetical protein [KO:K20221]
PHYSODRAFT_358354  hypothetical protein [KO:K20222]
PHYSODRAFT_509599  hypothetical protein [KO:K20222]
PHYSODRAFT_318393  hypothetical protein [KO:K20223]
PHYSODRAFT_561309  hypothetical protein [KO:K20224]
PHYSODRAFT_473812  hypothetical protein [KO:K25201]
PHYSODRAFT_476071  hypothetical protein [KO:K13151]
PHYSODRAFT_509857  hypothetical protein [KO:K14290]
PHYSODRAFT_492973  hypothetical protein [KO:K14288]
PHYSODRAFT_486369  hypothetical protein [KO:K25203]
PHYSODRAFT_343184  hypothetical protein [KO:K14289]
PHYSODRAFT_529204  hypothetical protein [KO:K14289]
PHYSODRAFT_524761  hypothetical protein [KO:K25204]
PHYSODRAFT_311826  hypothetical protein [KO:K18460]
PHYSODRAFT_288419  GTP-binding protein [KO:K07936]
PHYSODRAFT_354065  hypothetical protein [KO:K03231]
PHYSODRAFT_354062  hypothetical protein [KO:K03231]
PHYSODRAFT_565758  hypothetical protein [KO:K14291]
PHYSODRAFT_308481  hypothetical protein [KO:K12882]
PHYSODRAFT_303573  hypothetical protein [KO:K12883]
PHYSODRAFT_480926  hypothetical protein [KO:K07562]
PHYSODRAFT_350547  hypothetical protein [KO:K07562]
PHYSODRAFT_317912  hypothetical protein [KO:K12876]
PHYSODRAFT_314749  hypothetical protein [KO:K12877]
PHYSODRAFT_352190  hypothetical protein [KO:K13025] [EC:5.6.2.7]
PHYSODRAFT_286598  hypothetical protein [KO:K14324]
PHYSODRAFT_361180  hypothetical protein [KO:K13114]
PHYSODRAFT_470000  hypothetical protein [KO:K12881]
PHYSODRAFT_547735  hypothetical protein [KO:K14327]
PHYSODRAFT_309277  hypothetical protein [KO:K12812] [EC:5.6.2.7]
PHYSODRAFT_555033  hypothetical protein [KO:K13171]
PHYSODRAFT_330130  hypothetical protein [KO:K13171]
PHYSODRAFT_495402  hypothetical protein [KO:K14294]
PHYSODRAFT_540491  hypothetical protein [KO:K12878]
PHYSODRAFT_348397  hypothetical protein [KO:K12879]
PHYSODRAFT_566065  hypothetical protein [KO:K13174]
PHYSODRAFT_501592  hypothetical protein [KO:K13175]
PHYSODRAFT_323069  hypothetical protein [KO:K13176]
PHYSODRAFT_324947  hypothetical protein [KO:K12880]
Reference
  Authors
Tran EJ, Wente SR
  Title
Dynamic nuclear pore complexes: life on the edge.
  Journal
Cell 125:1041-53 (2006)
DOI:10.1016/j.cell.2006.05.027
Reference
  Authors
Rodriguez MS, Dargemont C, Stutz F
  Title
Nuclear export of RNA.
  Journal
Biol Cell 96:639-55 (2004)
DOI:10.1016/j.biolcel.2004.04.014
Reference
  Authors
Palancade B, Doye V
  Title
Sumoylating and desumoylating enzymes at nuclear pores: underpinning their unexpected duties?
  Journal
Trends Cell Biol 18:174-83 (2008)
DOI:10.1016/j.tcb.2008.02.001
Reference
  Authors
Reed R, Cheng H
  Title
TREX, SR proteins and export of mRNA.
  Journal
Curr Opin Cell Biol 17:269-73 (2005)
DOI:10.1016/j.ceb.2005.04.011
Reference
  Authors
Tange TO, Shibuya T, Jurica MS, Moore MJ
  Title
Biochemical analysis of the EJC reveals two new factors and a stable tetrameric protein core.
  Journal
RNA 11:1869-83 (2005)
DOI:10.1261/rna.2155905
Reference
  Authors
Beck M, Schirmacher P, Singer S
  Title
Alterations of the nuclear transport system in hepatocellular carcinoma - New basis for therapeutic strategies.
  Journal
J Hepatol 67:1051-1061 (2017)
DOI:10.1016/j.jhep.2017.06.021
Related
pathway
psoj03015  mRNA surveillance pathway
KO pathway
ko03013   
LinkDB

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