KEGG   PATHWAY: qsa04120
Entry
qsa04120                    Pathway                                
Name
Ubiquitin mediated proteolysis - Quillaja saponaria (soapbark tree)
Description
Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
qsa04120  Ubiquitin mediated proteolysis
qsa04120

Other DBs
GO: 0016567
Organism
Quillaja saponaria (soapbark tree) [GN:qsa]
Gene
O6P43_010314  Polyubiquitin [KO:K08770]
O6P43_011876  Polyubiquitin [KO:K08770]
O6P43_006665  Polyubiquitin [KO:K08770]
O6P43_006682  Polyubiquitin [KO:K08770]
O6P43_005297  Polyubiquitin [KO:K08770]
O6P43_009596  Ubiquitin [KO:K02927]
O6P43_019983  Ubiquitin [KO:K02927]
O6P43_014951  Ubiquitin [KO:K02927]
O6P43_007307  Ribosomal protein S27a / Ubiquitin family protein [KO:K02977]
O6P43_025276  Ribosomal protein S27a / Ubiquitin family protein [KO:K02977]
O6P43_008940  Ribosomal protein S27a / Ubiquitin family protein [KO:K02977]
O6P43_010905  Ribosomal protein S27a / Ubiquitin family protein [KO:K02977]
O6P43_033183  Ribosomal protein S27a / Ubiquitin family protein [KO:K02977]
O6P43_016559  Ubiquitin activating enzyme E1 [KO:K03178] [EC:6.2.1.45]
O6P43_026268  Ubiquitin activating enzyme E1 [KO:K03178] [EC:6.2.1.45]
O6P43_020387  putative Ubiquitin-activating enzyme E1 [KO:K03178] [EC:6.2.1.45]
O6P43_014083  putative Ubiquitin-activating enzyme E1 [KO:K03178] [EC:6.2.1.45]
O6P43_023552  SUMO-activating enzyme subunit 1B [KO:K10684] [EC:6.2.1.45]
O6P43_030706  SUMO-activating enzyme subunit 1B [KO:K10684] [EC:6.2.1.45]
O6P43_001868  SUMO-activating enzyme subunit 2 [KO:K10685] [EC:6.2.1.45]
O6P43_002010  SUMO-activating enzyme subunit 2 [KO:K10685] [EC:6.2.1.45]
O6P43_011562  SUMO-activating enzyme subunit 2 [KO:K10685] [EC:6.2.1.45]
O6P43_003417  NEDD8-activating enzyme E1 catalytic subunit [KO:K10686] [EC:6.2.1.64]
O6P43_021610  NEDD8-activating enzyme E1 catalytic subunit [KO:K10686] [EC:6.2.1.64]
O6P43_033953  Ubiquitin-conjugating enzyme E2 2 [KO:K10573] [EC:2.3.2.23]
O6P43_033969  Ubiquitin-conjugating enzyme E2 2 [KO:K10573] [EC:2.3.2.23]
O6P43_024502  Ubiquitin-conjugating enzyme E2 2 [KO:K10573] [EC:2.3.2.23]
O6P43_025426  Ubiquitin-conjugating enzyme, E2 [KO:K10573] [EC:2.3.2.23]
O6P43_030964  Ubiquitin-conjugating enzyme, E2 [KO:K10573] [EC:2.3.2.23]
O6P43_022811  Ubiquitin-conjugating enzyme, E2 [KO:K10573] [EC:2.3.2.23]
O6P43_033053  Ubiquitin-conjugating enzyme E2 [KO:K10573] [EC:2.3.2.23]
O6P43_020252  Ubiquitin-conjugating enzyme, E2 [KO:K06688] [EC:2.3.2.23]
O6P43_013925  Ubiquitin-conjugating enzyme, E2 [KO:K06688] [EC:2.3.2.23]
O6P43_005051  Ubiquitin-conjugating enzyme, E2 [KO:K06688] [EC:2.3.2.23]
O6P43_034310  Ubiquitin conjugating enzyme E2 [KO:K06689] [EC:2.3.2.23]
O6P43_016453  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_024007  Ubiquitin conjugating enzyme E2 [KO:K06689] [EC:2.3.2.23]
O6P43_008005  Ubiquitin-conjugating enzyme E2-like protein [KO:K06689] [EC:2.3.2.23]
O6P43_017733  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_026367  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_027338  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_011456  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_019874  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_020469  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_004090  Ubiquitin-conjugating enzyme E2-like protein [KO:K06689] [EC:2.3.2.23]
O6P43_013436  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_014164  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_021367  Ubiquitin-conjugating enzyme, E2 [KO:K06689] [EC:2.3.2.23]
O6P43_015049  Ubiquitin-conjugating enzyme E2 protein [KO:K06689] [EC:2.3.2.23]
O6P43_000225  Ubiquitin-conjugating enzyme, E2 [KO:K10575] [EC:2.3.2.23]
O6P43_028255  Ubiquitin-conjugating enzyme, E2 [KO:K10575] [EC:2.3.2.23]
O6P43_005688  Ubiquitin-conjugating enzyme, E2 [KO:K10575] [EC:2.3.2.23]
O6P43_034259  Ubiquitin-conjugating enzyme, E2 [KO:K10576] [EC:2.3.2.23]
O6P43_024159  Ubiquitin-conjugating enzyme, E2 [KO:K10576] [EC:2.3.2.23]
O6P43_017642  Ubiquitin-conjugating enzyme, E2 [KO:K10576] [EC:2.3.2.23]
O6P43_027248  Ubiquitin-conjugating enzyme, E2 [KO:K10576] [EC:2.3.2.23]
O6P43_030896  Ubiquitin-conjugating enzyme, E2 [KO:K10576] [EC:2.3.2.23]
O6P43_022737  Ubiquitin-conjugating enzyme, E2 [KO:K10576] [EC:2.3.2.23]
O6P43_034520  SUMO-conjugating enzyme [KO:K10577]
O6P43_024613  SUMO-conjugating enzyme [KO:K10577]
O6P43_018952  SUMO-conjugating enzyme [KO:K10577]
O6P43_016039  SUMO-conjugating enzyme [KO:K10577]
O6P43_033844  SUMO-conjugating enzyme [KO:K10577]
O6P43_003665  Ubiquitin-conjugating enzyme, E2 [KO:K10578] [EC:2.3.2.23]
O6P43_021851  Ubiquitin-conjugating enzyme, E2 [KO:K10578] [EC:2.3.2.23]
O6P43_027475  Ubiquitin-conjugating enzyme, E2 [KO:K04554] [EC:2.3.2.23]
O6P43_018478  Ubiquitin-conjugating enzyme, E2 [KO:K04554] [EC:2.3.2.23]
O6P43_023530  putative Ubiquitin-conjugating enzyme E2 [KO:K04649] [EC:2.3.2.23]
O6P43_030682  putative Ubiquitin-conjugating enzyme E2 [KO:K04649] [EC:2.3.2.23]
O6P43_024726  Ubiquitin-conjugating enzyme [KO:K10579] [EC:2.3.2.34]
O6P43_018843  Ubiquitin-conjugating enzyme family protein [KO:K10579] [EC:2.3.2.34]
O6P43_016141  Ubiquitin-conjugating enzyme family protein [KO:K10579] [EC:2.3.2.34]
O6P43_033748  Ubiquitin-conjugating enzyme family protein [KO:K10579] [EC:2.3.2.34]
O6P43_001032  Ubiquitin-conjugating enzyme E2 [KO:K10580] [EC:2.3.2.23]
O6P43_029174  Ubiquitin-conjugating enzyme E2 [KO:K10580] [EC:2.3.2.23]
O6P43_000962  Ubiquitin-conjugating enzyme like [KO:K10581] [EC:2.3.2.24]
O6P43_002140  Ubiquitin-conjugating enzyme [KO:K10581] [EC:2.3.2.24]
O6P43_028815  Ubiquitin-conjugating enzyme like [KO:K10581] [EC:2.3.2.24]
O6P43_029101  Ubiquitin-conjugating enzyme like [KO:K10581] [EC:2.3.2.24]
O6P43_012647  Ubiquitin-conjugating enzyme [KO:K10581] [EC:2.3.2.24]
O6P43_021871  putative Ubiquitin conjugating enzyme [KO:K10581] [EC:2.3.2.24]
O6P43_021872  Ubiquitin-conjugating enzyme [KO:K10581] [EC:2.3.2.24]
O6P43_009969  Ubiquitin-conjugating enzyme, E2 [KO:K10583] [EC:2.3.2.23]
O6P43_006279  Ubiquitin-conjugating enzyme, E2 [KO:K10583] [EC:2.3.2.23]
O6P43_024823  Ubiquitin conjugating enzyme [KO:K10688] [EC:2.3.2.23 2.3.2.25]
O6P43_033650  Ubiquitin conjugating enzyme [KO:K10688] [EC:2.3.2.23 2.3.2.25]
O6P43_009493  E3 ubiquitin-protein ligase UPL7 [KO:K10588] [EC:2.3.2.26]
O6P43_003713  E3 ubiquitin-protein ligase UPL6 [KO:K10589] [EC:2.3.2.26]
O6P43_021899  E3 ubiquitin-protein ligase UPL6 [KO:K10589] [EC:2.3.2.26]
O6P43_002119  E3 ubiquitin-protein ligase UPL3-like [KO:K10590] [EC:2.3.2.26]
O6P43_011460  E3 ubiquitin-protein ligase UPL3-like [KO:K10590] [EC:2.3.2.26]
O6P43_006709  E3 ubiquitin-protein ligase UPL4 [KO:K10590] [EC:2.3.2.26]
O6P43_019549  E3 ubiquitin-protein ligase UPL1-like [KO:K10592] [EC:2.3.2.26]
O6P43_013394  E3 ubiquitin-protein ligase UPL1 [KO:K10592] [EC:2.3.2.26]
O6P43_015442  E3 ubiquitin-protein ligase UPL1-like [KO:K10592] [EC:2.3.2.26]
O6P43_004434  Ubiquitin conjugation factor like [KO:K10597] [EC:2.3.2.27]
O6P43_016950  E3 ubiquitin-protein ligase CHIP [KO:K09561] [EC:2.3.2.27]
O6P43_026726  E3 ubiquitin-protein ligase CHIP [KO:K09561] [EC:2.3.2.27]
O6P43_024547  Peptidyl-prolyl cis-trans isomerase [KO:K10598] [EC:5.2.1.8]
O6P43_003156  pre-mRNA-processing factor 19-like [KO:K10599] [EC:2.3.2.27]
O6P43_022060  Pre-mRNA-processing factor 19 [KO:K10599] [EC:2.3.2.27]
O6P43_017787  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_009313  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_009323  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_009462  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_027378  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_001462  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_019940  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_029684  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_005664  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_005665  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_005820  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_015002  E3 ubiquitin-protein ligase [KO:K04506] [EC:2.3.2.27]
O6P43_008233  E3 ubiquitin-protein ligase COP1 [KO:K10143] [EC:2.3.2.27]
O6P43_020787  E3 ubiquitin-protein ligase COP1 [KO:K10143] [EC:2.3.2.27]
O6P43_005578  E3 ubiquitin-protein ligase COP1 [KO:K10143] [EC:2.3.2.27]
O6P43_014547  E3 ubiquitin-protein ligase COP1 [KO:K10143] [EC:2.3.2.27]
O6P43_007118  E3 ubiquitin-protein ligase MIEL1-like [KO:K10144] [EC:2.3.2.27]
O6P43_000385  RING finger and CHY zinc finger protein [KO:K10144] [EC:2.3.2.27]
O6P43_028433  RING finger and CHY zinc finger protein [KO:K10144] [EC:2.3.2.27]
O6P43_019385  RING finger and CHY zinc finger protein [KO:K10144] [EC:2.3.2.27]
O6P43_003516  RING finger and CHY zinc finger domain-containing protein 1 [KO:K10144] [EC:2.3.2.27]
O6P43_021701  RING finger and CHY zinc finger domain-containing protein 1 [KO:K10144] [EC:2.3.2.27]
O6P43_015617  RING finger and CHY zinc finger protein [KO:K10144] [EC:2.3.2.27]
O6P43_006606  RING finger and CHY zinc finger protein [KO:K10144] [EC:2.3.2.27]
O6P43_034283  E4 SUMO-protein ligase PIAL2 [KO:K04706] [EC:2.3.2.-]
O6P43_024126  E4 SUMO-protein ligase PIAL2 [KO:K04706] [EC:2.3.2.-]
O6P43_030151  E3 ubiquitin ligase [KO:K10601] [EC:2.3.2.27]
O6P43_024504  E3 ubiquitin-protein ligase FANCL-like [KO:K10606] [EC:2.3.2.27]
O6P43_027535  RING-box protein 1a [KO:K03868] [EC:2.3.2.32]
O6P43_018413  RING-box protein 1a-like [KO:K03868] [EC:2.3.2.32]
O6P43_002658  RING-box protein 1a [KO:K03868] [EC:2.3.2.32]
O6P43_022498  RING-box protein 1a [KO:K03868] [EC:2.3.2.32]
O6P43_007135  cullin 1 [KO:K03347]
O6P43_010735  cullin 1 [KO:K03347]
O6P43_021720  Cullin-1 [KO:K03347]
O6P43_024900  SKP1-like protein [KO:K03094]
O6P43_024901  SKP1-like protein [KO:K03094]
O6P43_001227  SKP1 [KO:K03094]
O6P43_018709  putative Skp1 [KO:K03094]
O6P43_002132  SKP1-like protein [KO:K03094]
O6P43_002133  SKP1-like protein [KO:K03094]
O6P43_011445  SKP1-like protein [KO:K03094]
O6P43_029378  SKP1 [KO:K03094]
O6P43_021721  SKP1-like protein [KO:K03094]
O6P43_016302  putative Skp1 [KO:K03094]
O6P43_033582  SKP1-like protein [KO:K03094]
O6P43_019830  F-box protein like [KO:K03875]
O6P43_015091  F-box protein like [KO:K03875]
O6P43_000161  Transcription elongation factor B polypeptide 1 [KO:K03872]
O6P43_028174  Transcription elongation factor B polypeptide 1 [KO:K03872]
O6P43_002968  Ubiquitin-like protein [KO:K03873]
O6P43_022219  Ubiquitin-like protein [KO:K03873]
O6P43_009072  Cullin [KO:K03869]
O6P43_025449  Cullin [KO:K03869]
O6P43_004496  Cullin [KO:K03869]
O6P43_033031  Cullin [KO:K03869]
O6P43_033032  putative Cullin [KO:K03869]
O6P43_012978  Cullin [KO:K10609]
O6P43_032129  Cullin [KO:K10609]
O6P43_013074  DNA damage-binding protein [KO:K10610]
O6P43_014034  damaged DNA binding 2 [KO:K10140]
O6P43_019014  DNA excision repair protein ERCC-8 [KO:K10570]
O6P43_022108  Light-mediated development protein DET1 [KO:K10571]
O6P43_025490  Anaphase promoting complex subunit 2 [KO:K03349]
O6P43_009406  cell division cycle 20.2, cofactor of APC complex-like [KO:K03363]
O6P43_030120  cell division cycle 20.2, cofactor of APC complex-like [KO:K03363]
O6P43_030126  cell division cycle 20.2, cofactor of APC complex-like [KO:K03363]
O6P43_004865  cell division cycle 20.2, cofactor of APC complex-like [KO:K03363]
O6P43_005759  cell division cycle 20.2, cofactor of APC complex-like [KO:K03363]
O6P43_024251  Protein FIZZY-RELATED 2 [KO:K03364]
O6P43_020620  FIZZY-related 2 [KO:K03364]
O6P43_014333  FIZZY-related 2 [KO:K03364]
O6P43_020187  anaphase-promoting complex subunit 1 [KO:K03348]
O6P43_007876  Cell division cycle protein 27 like B [KO:K03350]
O6P43_003981  Cell division cycle protein 27 like B [KO:K03350]
O6P43_031773  Anaphase-promoting complex subunit 4 [KO:K03351]
O6P43_014764  anaphase-promoting complex subunit 5 [KO:K03352]
O6P43_029194  anaphase-promoting complex subunit 6 [KO:K03353]
O6P43_003526  anaphase-promoting complex subunit 7 [KO:K03354]
O6P43_021707  anaphase-promoting complex subunit 7 [KO:K03354]
O6P43_030917  anaphase-promoting complex subunit 8 [KO:K03355]
O6P43_022759  anaphase-promoting complex subunit 8 [KO:K03355]
O6P43_024774  Anaphase-promoting complex subunit 10 [KO:K03357]
O6P43_033695  Anaphase-promoting complex subunit 10 [KO:K03357]
Reference
  Authors
Kamura T.
  Title
[Cullin-based E3 family]
  Journal
Tanpakushitsu Kakusan Koso 51:1167-72 (2006)
Reference
  Authors
Matsuda N.
  Title
[Overview: hereditary disorders caused by dysfunction of ubiquitylation]
  Journal
Tanpakushitsu Kakusan Koso 51:1402-7 (2006)
Reference
  Authors
Tokunaga F.
  Title
[E2 ubiquitin-conjugating enzymes: structures and functions]
  Journal
Tanpakushitsu Kakusan Koso 51:1150-6 (2006)
Reference
  Authors
Nalepa G, Rolfe M, Harper JW.
  Title
Drug discovery in the ubiquitin-proteasome system.
  Journal
Nat Rev Drug Discov 5:596-613 (2006)
DOI:10.1038/nrd2056
Reference
  Authors
Hsu YJ, Goodman SR.
  Title
Spectrin and ubiquitination: a review.
  Journal
Cell Mol Biol (Noisy-le-grand) Suppl 51:OL801-7 (2005)
Reference
  Authors
Hatakeyama S, Nakayama KI.
  Title
Ubiquitylation as a quality control system for intracellular proteins.
  Journal
J Biochem 134:1-8 (2003)
DOI:10.1093/jb/mvg106
Reference
  Authors
Lee J, Zhou P.
  Title
DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase.
  Journal
Mol Cell 26:775-80 (2007)
DOI:10.1016/j.molcel.2007.06.001
Related
pathway
qsa03050  Proteasome
KO pathway
ko04120   
LinkDB

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