KEGG   PATHWAY: vas00230
Entry
vas00230                    Pathway                                
Name
Purine metabolism - Vibrio astriarenae
Class
Metabolism; Nucleotide metabolism
Pathway map
vas00230  Purine metabolism
vas00230

Module
vas_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vas00230]
vas_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vas00230]
vas_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vas00230]
vas_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vas00230]
vas_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vas00230]
Other DBs
GO: 0006163 0042278
Organism
Vibrio astriarenae [GN:vas]
Gene
GT360_02700  ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
GT360_09120  NUDIX domain-containing protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
GT360_17195  NUDIX domain-containing protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
GT360_13780  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
GT360_11615  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
GT360_10430  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
GT360_04185  prs; ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
GT360_06005  ribose-phosphate pyrophosphokinase-like domain-containing protein [KO:K00948] [EC:2.7.6.1]
GT360_04575  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
GT360_01225  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
GT360_10745  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
GT360_07620  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
GT360_03635  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
GT360_10740  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
GT360_00425  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
GT360_00430  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
GT360_08850  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
GT360_05145  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
GT360_01230  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
GT360_09980  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
GT360_07880  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
GT360_19925  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
GT360_04230  ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
GT360_12350  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
GT360_05160  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
GT360_17310  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
GT360_11610  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
GT360_21065  DUF1255 family protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
GT360_03090  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
GT360_12085  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
GT360_21420  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
GT360_03245  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
GT360_03190  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
GT360_03050  yjjX; non-canonical purine NTP phosphatase [KO:K01529] [EC:3.6.1.73]
GT360_02115  XTP/dITP diphosphatase [KO:K01519] [EC:3.6.1.66]
GT360_10990  xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
GT360_03250  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
GT360_19890  GMP reductase [KO:K00364] [EC:1.7.1.7]
GT360_15440  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
GT360_01125  guanylate kinase [KO:K00942] [EC:2.7.4.8]
GT360_07710  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
GT360_07715  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
GT360_21475  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
GT360_04860  dgt; dNTP triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
GT360_04865  5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
GT360_01115  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
GT360_00635  gppA; guanosine-5'-triphosphate,3'-diphosphate diphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
GT360_03390  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
GT360_02620  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
GT360_00740  class I adenylate cyclase [KO:K05851] [EC:4.6.1.1]
GT360_01600  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
GT360_13920  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
GT360_03770  DUF3412 domain-containing protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
GT360_01790  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
GT360_03895  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
GT360_05450  bifunctional metallophosphatase/5'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
GT360_05800  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
GT360_04140  adenylate kinase [KO:K00939] [EC:2.7.4.3]
GT360_02625  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
GT360_02710  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
GT360_18485  phosphodiesterase [KO:K03651] [EC:3.1.4.53]
GT360_02275  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
GT360_01815  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
GT360_13480  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
GT360_01805  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
GT360_13470  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
GT360_01800  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
GT360_13490  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
GT360_06950  allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
GT360_06945  aminotransferase class V-fold PLP-dependent enzyme [KO:K00839] [EC:2.6.1.112]
GT360_11215  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
GT360_11220  urease subunit beta [KO:K01429] [EC:3.5.1.5]
GT360_11225  ureA; urease subunit gamma [KO:K01430] [EC:3.5.1.5]
GT360_06940  gamma-glutamyltransferase [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
vas00030  Pentose phosphate pathway
vas00220  Arginine biosynthesis
vas00250  Alanine, aspartate and glutamate metabolism
vas00260  Glycine, serine and threonine metabolism
vas00340  Histidine metabolism
vas00630  Glyoxylate and dicarboxylate metabolism
vas00730  Thiamine metabolism
vas00740  Riboflavin metabolism
vas00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

DBGET integrated database retrieval system