KEGG   PATHWAY: plum00230
Entry
plum00230                   Pathway                                
Name
Purine metabolism - Photorhabdus laumondii subsp. laumondii DSPV002N
Class
Metabolism; Nucleotide metabolism
Pathway map
plum00230  Purine metabolism
plum00230

Module
plum_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:plum00230]
plum_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:plum00230]
plum_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:plum00230]
plum_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:plum00230]
plum_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:plum00230]
Other DBs
GO: 0006163 0042278
Organism
Photorhabdus laumondii subsp. laumondii DSPV002N [GN:plum]
Gene
A4R40_19655  nudF; ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
A4R40_00475  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
A4R40_02585  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
A4R40_07070  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
A4R40_10355  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
A4R40_15815  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
A4R40_11020  hypothetical protein [KO:K01945] [EC:6.3.4.13]
A4R40_02425  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
A4R40_13760  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
A4R40_16550  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
A4R40_13755  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
A4R40_18950  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
A4R40_18945  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
A4R40_13670  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
A4R40_13990  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
A4R40_02430  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
A4R40_19110  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
A4R40_19045  ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
A4R40_03580  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
A4R40_19065  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
A4R40_02590  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
A4R40_06295  hypothetical protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
A4R40_21265  rihB; ribonucleoside hydrolase [KO:K25589] [EC:3.2.2.2 3.2.2.3]
A4R40_04295  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
A4R40_04315  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
A4R40_13510  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
A4R40_11985  hypothetical protein [KO:K00940] [EC:2.7.4.6]
A4R40_06855  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
A4R40_02765  inosine/xanthosine triphosphatase [KO:K01529] [EC:3.6.1.73]
A4R40_05815  non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
A4R40_14055  hypothetical protein [KO:K01519] [EC:3.6.1.66]
A4R40_06130  xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
A4R40_13505  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
A4R40_01340  guanylate kinase [KO:K00942] [EC:2.7.4.8]
A4R40_15250  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
A4R40_06395  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
A4R40_15255  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
A4R40_06390  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
A4R40_22275  anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
A4R40_04530  dgt; deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
A4R40_15455  5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
A4R40_01330  (p)ppGpp synthetase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
A4R40_13775  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
A4R40_23145  guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
A4R40_04545  relA; (p)ppGpp synthetase [KO:K00951] [EC:2.7.6.5]
A4R40_23010  cyaA; adenylate cyclase [KO:K05851] [EC:4.6.1.1]
A4R40_22675  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
A4R40_03970  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
A4R40_11785  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
A4R40_13815  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
A4R40_03270  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
A4R40_19525  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
A4R40_19080  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
A4R40_04550  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
A4R40_19650  3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
A4R40_03000  apaH; diadenosine tetraphosphatase [KO:K01525] [EC:3.6.1.41]
A4R40_03555  adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
A4R40_03550  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
A4R40_03545  sulfate adenylyltransferase small subunit [KO:K00957] [EC:2.7.7.4]
A4R40_10900  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
A4R40_10895  urease subunit beta [KO:K01429] [EC:3.5.1.5]
A4R40_10890  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
plum00030  Pentose phosphate pathway
plum00220  Arginine biosynthesis
plum00250  Alanine, aspartate and glutamate metabolism
plum00260  Glycine, serine and threonine metabolism
plum00340  Histidine metabolism
plum00630  Glyoxylate and dicarboxylate metabolism
plum00730  Thiamine metabolism
plum00740  Riboflavin metabolism
plum00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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