KEGG   PATHWAY: ppel00230
Entry
ppel00230                   Pathway                                
Name
Purine metabolism - Pseudonocardia petroleophila
Class
Metabolism; Nucleotide metabolism
Pathway map
ppel00230  Purine metabolism
ppel00230

Module
ppel_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ppel00230]
ppel_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppel00230]
ppel_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppel00230]
ppel_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppel00230]
ppel_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppel00230]
Other DBs
GO: 0006163 0042278
Organism
Pseudonocardia petroleophila [GN:ppel]
Gene
H6H00_30085  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
H6H00_00630  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
H6H00_04300  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
H6H00_06125  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
H6H00_06245  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
H6H00_12625  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
H6H00_06140  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
H6H00_06165  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
H6H00_06160  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
H6H00_06120  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
H6H00_13120  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
H6H00_13125  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
H6H00_06190  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
H6H00_06195  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
H6H00_12630  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
H6H00_22415  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
H6H00_02460  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
H6H00_08940  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
H6H00_12920  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
H6H00_27445  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
H6H00_08865  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
H6H00_12520  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
H6H00_12525  GuaB3 family IMP dehydrogenase-related protein [KO:K00088] [EC:1.1.1.205]
H6H00_15725  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
H6H00_02380  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
H6H00_12545  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
H6H00_03955  GuaB1 family IMP dehydrogenase-related protein [KO:K26110] [EC:1.7.1.7]
H6H00_22695  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
H6H00_17080  vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
H6H00_12030  R2-like ligand-binding oxidase [KO:K00526] [EC:1.17.4.1]
H6H00_18455  R2-like ligand-binding oxidase [KO:K00526] [EC:1.17.4.1]
H6H00_16400  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
H6H00_23130  dgt; dNTP triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
H6H00_22420  RelA/SpoT family protein [KO:K01139] [EC:2.7.6.5 3.1.7.2]
H6H00_04170  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
H6H00_11230  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
H6H00_23115  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
H6H00_09180  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
H6H00_17710  carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
H6H00_12850  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
H6H00_12255  adenylate kinase [KO:K00939] [EC:2.7.4.3]
H6H00_22090  HIT domain-containing protein [KO:K19710] [EC:2.7.7.53]
H6H00_16175  50S ribosome-binding GTPase [KO:K00956] [EC:2.7.7.4]
H6H00_16180  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
H6H00_24935  pucL; urate oxidase [KO:K00365] [EC:1.7.3.3]
H6H00_27830  hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
H6H00_09255  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
H6H00_24940  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
H6H00_09260  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K16840] [EC:4.1.1.97]
H6H00_24945  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K16840] [EC:4.1.1.97]
H6H00_24895  allB; allantoinase AllB [KO:K01466] [EC:3.5.2.5]
H6H00_24890  alc; allantoicase [KO:K01477] [EC:3.5.3.4]
H6H00_09215  urease subunit alpha [KO:K01428] [EC:3.5.1.5]
H6H00_09210  urease subunit beta [KO:K01429] [EC:3.5.1.5]
H6H00_09205  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
H6H00_22275  carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
ppel00030  Pentose phosphate pathway
ppel00220  Arginine biosynthesis
ppel00250  Alanine, aspartate and glutamate metabolism
ppel00260  Glycine, serine and threonine metabolism
ppel00340  Histidine metabolism
ppel00630  Glyoxylate and dicarboxylate metabolism
ppel00730  Thiamine metabolism
ppel00740  Riboflavin metabolism
ppel00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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