KEGG   PATHWAY: psew00230
Entry
psew00230                   Pathway                                
Name
Purine metabolism - Paracoccus seriniphilus
Class
Metabolism; Nucleotide metabolism
Pathway map
psew00230  Purine metabolism
psew00230

Module
psew_M00005  PRPP biosynthesis, ribose-5P => PRPP [PATH:psew00230]
psew_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:psew00230]
psew_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:psew00230]
psew_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:psew00230]
psew_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:psew00230]
psew_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:psew00230]
psew_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:psew00230]
Other DBs
GO: 0006163 0042278
Organism
Paracoccus seriniphilus [GN:psew]
Gene
JHW44_00275  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
JHW44_00735  [KO:K06952] [EC:3.1.3.89]
JHW44_00990  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
JHW44_01125  [KO:K01241] [EC:3.2.2.4]
JHW44_01210  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
JHW44_01215  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
JHW44_01980  [KO:K01483] [EC:4.3.2.3]
JHW44_02835  [KO:K03783] [EC:2.4.2.1]
JHW44_03445  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265]
JHW44_03775  [KO:K00759] [EC:2.4.2.7]
JHW44_04090  [KO:K00939] [EC:2.7.4.3]
JHW44_04930  [KO:K11751] [EC:3.1.3.5 3.6.1.45]
JHW44_05465  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
JHW44_05470  [KO:K01589] [EC:6.3.4.18]
JHW44_05480  [KO:K00764] [EC:2.4.2.14]
JHW44_05645  gpt; xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
JHW44_06005  [KO:K01933] [EC:6.3.3.1]
JHW44_06010  [KO:K11175] [EC:2.1.2.2]
JHW44_06075  [KO:K09769] [EC:3.1.4.16]
JHW44_06230  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
JHW44_06835  [KO:K01756] [EC:4.3.2.2]
JHW44_07325  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
JHW44_07380  [KO:K01524] [EC:3.6.1.11 3.6.1.40]
JHW44_07885  [KO:K01524] [EC:3.6.1.11 3.6.1.40]
JHW44_08410  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269]
JHW44_08960  ade; adenine deaminase [KO:K01486] [EC:3.5.4.2]
JHW44_09010  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
JHW44_09100  [KO:K01488] [EC:3.5.4.4]
JHW44_09105  [KO:K01839] [EC:5.4.2.7]
JHW44_09170  [KO:K01939] [EC:6.3.4.4]
JHW44_09480  [KO:K00958] [EC:2.7.7.4]
JHW44_09500  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
JHW44_09620  dgt; dNTP triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
JHW44_10015  [KO:K01119] [EC:3.1.4.16 3.1.3.6]
JHW44_10025  [KO:K00948] [EC:2.7.6.1]
JHW44_10255  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
JHW44_10405  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
JHW44_10465  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
JHW44_10475  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
JHW44_10480  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
JHW44_10500  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
JHW44_10515  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
JHW44_10520  [KO:K14977] [EC:3.5.3.26]
JHW44_11030  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
JHW44_11190  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264]
JHW44_11195  [KO:K01923] [EC:6.3.2.6]
JHW44_11330  [KO:K01129] [EC:3.1.5.1]
JHW44_11640  [KO:K01139] [EC:2.7.6.5 3.1.7.2]
JHW44_11970  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
JHW44_11985  [KO:K01430] [EC:3.5.1.5]
JHW44_11995  [KO:K01429] [EC:3.5.1.5]
JHW44_12000  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
JHW44_16520  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
JHW44_16525  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
JHW44_19685  [KO:K00525] [EC:1.17.4.1]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
psew00030  Pentose phosphate pathway
psew00220  Arginine biosynthesis
psew00250  Alanine, aspartate and glutamate metabolism
psew00260  Glycine, serine and threonine metabolism
psew00340  Histidine metabolism
psew00630  Glyoxylate and dicarboxylate metabolism
psew00730  Thiamine metabolism
psew00740  Riboflavin metabolism
psew00790  Folate biosynthesis
KO pathway
ko00230   

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