KEGG   PATHWAY: sgla00230
Entry
sgla00230                   Pathway                                
Name
Purine metabolism - Shewanella glacialimarina
Class
Metabolism; Nucleotide metabolism
Pathway map
sgla00230  Purine metabolism
sgla00230

Module
sgla_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sgla00230]
sgla_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sgla00230]
sgla_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sgla00230]
sgla_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sgla00230]
sgla_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sgla00230]
Other DBs
GO: 0006163 0042278
Organism
Shewanella glacialimarina [GN:sgla]
Gene
FJ709_16740  ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
FJ709_00585  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
FJ709_04805  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
FJ709_09485  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
FJ709_04290  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
FJ709_06210  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
FJ709_17320  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
FJ709_06820  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
FJ709_04550  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
FJ709_13330  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
FJ709_06825  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
FJ709_13870  purK; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
FJ709_13865  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
FJ709_01965  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
FJ709_08210  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
FJ709_17315  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
FJ709_11710  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
FJ709_13440  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
FJ709_01945  bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
FJ709_09335  bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
FJ709_14040  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
FJ709_08415  HAD-IIA family hydrolase [KO:K02566] [EC:3.1.3.5]
FJ709_00565  GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
FJ709_06540  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
FJ709_04810  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
FJ709_01280  pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
FJ709_15485  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
FJ709_03550  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
FJ709_13350  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
FJ709_07525  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
FJ709_03475  yjjX; non-canonical purine NTP phosphatase [KO:K01529] [EC:3.6.1.73]
FJ709_05210  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
FJ709_13345  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
FJ709_01580  guanylate kinase [KO:K00942] [EC:2.7.4.8]
FJ709_09865  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
FJ709_09870  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
FJ709_07355  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
FJ709_09885  deoxyguanosinetriphosphate triphosphohydrolase family protein [KO:K01129] [EC:3.1.5.1]
FJ709_17610  dGTPase [KO:K01129] [EC:3.1.5.1]
FJ709_01570  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
FJ709_17475  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
FJ709_14080  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
FJ709_14415  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
FJ709_02105  class I adenylate cyclase [KO:K05851] [EC:4.6.1.1]
FJ709_17005  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
FJ709_00235  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
FJ709_12715  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
FJ709_09200  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
FJ709_06530  adenylate kinase [KO:K00939] [EC:2.7.4.3]
FJ709_14075  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
FJ709_16730  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
FJ709_04495  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
FJ709_03440  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
FJ709_03430  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
FJ709_03425  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
sgla00030  Pentose phosphate pathway
sgla00220  Arginine biosynthesis
sgla00250  Alanine, aspartate and glutamate metabolism
sgla00260  Glycine, serine and threonine metabolism
sgla00340  Histidine metabolism
sgla00630  Glyoxylate and dicarboxylate metabolism
sgla00730  Thiamine metabolism
sgla00740  Riboflavin metabolism
sgla00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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