KEGG   PATHWAY: sinv00230
Entry
sinv00230                   Pathway                                
Name
Purine metabolism - Shewanella inventionis
Class
Metabolism; Nucleotide metabolism
Pathway map
sinv00230  Purine metabolism
sinv00230

Module
sinv_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sinv00230]
sinv_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sinv00230]
sinv_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sinv00230]
sinv_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sinv00230]
sinv_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sinv00230]
Other DBs
GO: 0006163 0042278
Organism
Shewanella inventionis [GN:sinv]
Gene
K8B83_05620  nudF; ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
K8B83_02740  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
K8B83_08125  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
K8B83_12040  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
K8B83_19290  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
K8B83_10195  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
K8B83_20765  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
K8B83_15605  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
K8B83_19010  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
K8B83_08875  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
K8B83_15600  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
K8B83_08525  purK; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
K8B83_08530  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
K8B83_04355  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
K8B83_13970  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
K8B83_20760  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
K8B83_10835  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
K8B83_08725  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
K8B83_11455  ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA [KO:K11751] [EC:3.1.3.5 3.6.1.45]
K8B83_08375  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
K8B83_11135  HAD-IIA family hydrolase [KO:K02566] [EC:3.1.3.5]
K8B83_02735  yrfG; GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
K8B83_10885  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
K8B83_08130  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
K8B83_00320  pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
K8B83_19535  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
K8B83_20180  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
K8B83_08855  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
K8B83_10795  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
K8B83_19835  yjjX; inosine/xanthosine triphosphatase [KO:K01529] [EC:3.6.1.73]
K8B83_17835  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
K8B83_08860  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
K8B83_00105  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
K8B83_12215  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
K8B83_12210  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
K8B83_10665  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
K8B83_11990  deoxyguanosinetriphosphate triphosphohydrolase family protein [KO:K01129] [EC:3.1.5.1]
K8B83_11995  yfbR; 5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
K8B83_00115  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
K8B83_15150  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
K8B83_20935  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
K8B83_08335  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
K8B83_18265  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
K8B83_21070  class I adenylate cyclase [KO:K05851] [EC:4.6.1.1]
K8B83_05505  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
K8B83_02400  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
K8B83_17135  ppnN; nucleotide 5'-monophosphate nucleosidase PpnN [KO:K06966] [EC:3.2.2.10 3.2.2.-]
K8B83_11320  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
K8B83_10880  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
K8B83_08340  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
K8B83_05630  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
K8B83_19060  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
K8B83_19865  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
K8B83_19875  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
K8B83_19880  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
sinv00030  Pentose phosphate pathway
sinv00220  Arginine biosynthesis
sinv00250  Alanine, aspartate and glutamate metabolism
sinv00260  Glycine, serine and threonine metabolism
sinv00340  Histidine metabolism
sinv00630  Glyoxylate and dicarboxylate metabolism
sinv00730  Thiamine metabolism
sinv00740  Riboflavin metabolism
sinv00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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