KEGG   PATHWAY: vcp00230
Entry
vcp00230                    Pathway                                
Name
Purine metabolism - Vagococcus carniphilus
Class
Metabolism; Nucleotide metabolism
Pathway map
vcp00230  Purine metabolism
vcp00230

Module
vcp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vcp00230]
vcp_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vcp00230]
Other DBs
GO: 0006163 0042278
Organism
Vagococcus carniphilus [GN:vcp]
Gene
H9L18_00185  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
H9L18_00525  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
H9L18_00530  [KO:K03783] [EC:2.4.2.1]
H9L18_00535  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
H9L18_00685  [KO:K01939] [EC:6.3.4.4]
H9L18_00845  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
H9L18_01175  [KO:K00939] [EC:2.7.4.3]
H9L18_01605  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
H9L18_01795  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
H9L18_02315  [KO:K09769] [EC:3.1.4.16]
H9L18_02520  [KO:K07816] [EC:2.7.6.5]
H9L18_02540  [KO:K01139] [EC:2.7.6.5 3.1.7.2]
H9L18_02870  [KO:K07816] [EC:2.7.6.5]
H9L18_05195  [KO:K00525] [EC:1.17.4.1]
H9L18_05610  [KO:K03816] [EC:2.4.2.22]
H9L18_05615  [KO:K01589] [EC:6.3.4.18]
H9L18_05640  guaC; GMP reductase [KO:K00364] [EC:1.7.1.7]
H9L18_06365  [KO:K01519] [EC:3.6.1.66]
H9L18_06520  allB; allantoinase AllB [KO:K01466] [EC:3.5.2.5]
H9L18_06525  allC; allantoate deiminase [KO:K02083] [EC:3.5.3.9]
H9L18_06535  [KO:K14977] [EC:3.5.3.26]
H9L18_06540  allD; ureidoglycolate dehydrogenase [KO:K00073] [EC:1.1.1.350]
H9L18_06555  arcC; carbamate kinase [KO:K00926] [EC:2.7.2.2]
H9L18_06570  [KO:K00839] [EC:2.6.1.112]
H9L18_08690  [KO:K01119] [EC:3.1.4.16 3.1.3.6]
H9L18_09230  [KO:K01835] [EC:5.4.2.2]
H9L18_09525  [KO:K00759] [EC:2.4.2.7]
H9L18_10095  [KO:K01515] [EC:3.6.1.13 3.6.1.-]
H9L18_10570  [KO:K07816] [EC:2.7.6.5]
H9L18_10580  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
H9L18_10585  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
H9L18_10590  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
H9L18_10595  [KO:K01933] [EC:6.3.3.1]
H9L18_10600  [KO:K00764] [EC:2.4.2.14]
H9L18_10605  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269]
H9L18_10610  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265]
H9L18_10615  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264]
H9L18_10620  [KO:K01923] [EC:6.3.2.6]
H9L18_10645  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
H9L18_10650  purK; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
H9L18_10655  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
H9L18_12075  [KO:K01839] [EC:5.4.2.7]
H9L18_12270  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
H9L18_12815  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
H9L18_12820  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
H9L18_12950  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
H9L18_13020  [KO:K01081] [EC:3.1.3.5]
H9L18_13460  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
H9L18_14330  [KO:K00948] [EC:2.7.6.1]
H9L18_14520  [KO:K21053] [EC:3.5.4.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
vcp00030  Pentose phosphate pathway
vcp00220  Arginine biosynthesis
vcp00250  Alanine, aspartate and glutamate metabolism
vcp00260  Glycine, serine and threonine metabolism
vcp00340  Histidine metabolism
vcp00630  Glyoxylate and dicarboxylate metabolism
vcp00730  Thiamine metabolism
vcp00740  Riboflavin metabolism
vcp00790  Folate biosynthesis
KO pathway
ko00230   

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