KEGG   PATHWAY: xcf00230
Entry
xcf00230                    Pathway                                
Name
Purine metabolism - Xanthomonas citri pv. citri mf20
Class
Metabolism; Nucleotide metabolism
Pathway map
xcf00230  Purine metabolism
xcf00230

Module
xcf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xcf00230]
xcf_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xcf00230]
xcf_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xcf00230]
xcf_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xcf00230]
xcf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xcf00230]
xcf_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:xcf00230]
Other DBs
GO: 0006163 0042278
Organism
Xanthomonas citri pv. citri mf20 [GN:xcf]
Gene
J172_01028  NTP pyrophosphohydrolase including oxidative damage repair enzymes [KO:K01515] [EC:3.6.1.13 3.6.1.-]
J172_03244  ADP-ribose pyrophosphatase [KO:K08312] [EC:3.6.1.-]
J172_03754  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
J172_04081  Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
J172_01067  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
J172_01148  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
J172_00623  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
J172_03137  formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
J172_01369  formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
J172_03724  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
J172_03135  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
J172_02849  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
J172_02850  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
J172_00584  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
J172_01682  Adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
J172_00625  IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
J172_02554  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
J172_01739  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
J172_01870  5'-nucleotidase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
J172_03391  uncharacterized protein, YfiH family [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
J172_01470  Hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
J172_02451  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
J172_02165  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
J172_03574  non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
J172_03068  xanthine dehydrogenase, molybdenum binding subunit apoprotein [KO:K11177] [EC:1.17.1.4]
J172_01315  xanthine dehydrogenase, molybdenum binding subunit apoprotein [KO:K11177] [EC:1.17.1.4]
J172_03069  Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein [KO:K11178] [EC:1.17.1.4]
J172_01316  Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein [KO:K11178] [EC:1.17.1.4]
J172_03070  Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein [KO:K13483]
J172_01317  Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein [KO:K13483]
J172_02450  GMP synthase (glutamine-hydrolyzing) [KO:K01951] [EC:6.3.5.2]
J172_04387  GMP synthase - Glutamine amidotransferase domain [KO:K01951] [EC:6.3.5.2]
J172_03570  guanylate kinase [KO:K00942] [EC:2.7.4.8]
J172_04243  ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
J172_04242  Ribonucleotide reductase, beta subunit [KO:K00526] [EC:1.17.4.1]
J172_03568  (p)ppGpp synthetase, RelA/SpoT family [KO:K01139] [EC:2.7.6.5 3.1.7.2]
J172_01157  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
J172_03286  (p)ppGpp synthetase, RelA/SpoT family [KO:K00951] [EC:2.7.6.5]
J172_01465  hypothetical protein [KO:K01768] [EC:4.6.1.1]
J172_01284  Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
J172_00767  Sugar kinase, ribokinase family [KO:K00856] [EC:2.7.1.20]
J172_00418  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
J172_02843  putative Rossmann fold nucleotide-binding protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
J172_03612  Adenylate kinase [KO:K00939] [EC:2.7.4.3]
J172_03242  MazG family protein [KO:K04765] [EC:3.6.1.9]
J172_00979  Bis(5'nucleosyl)-tetraphosphatase, ApaH [KO:K01525] [EC:3.6.1.41]
J172_03503  adenylylsulfate kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
J172_03504  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
J172_00406  putative flavoprotein involved in K+ transport [KO:K22879] [EC:1.14.13.113]
J172_00405  hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
J172_00407  OHCU decarboxylase [KO:K13485] [EC:4.1.1.97]
J172_00409  putative urate catabolism protein [KO:K16842] [EC:3.5.2.5]
J172_00411  amidase, hydantoinase/carbamoylase family [KO:K02083] [EC:3.5.3.9]
J172_00410  serine-pyruvate aminotransferase apoenzyme [KO:K00839] [EC:2.6.1.112]
J172_00415  gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
xcf00030  Pentose phosphate pathway
xcf00220  Arginine biosynthesis
xcf00250  Alanine, aspartate and glutamate metabolism
xcf00260  Glycine, serine and threonine metabolism
xcf00340  Histidine metabolism
xcf00630  Glyoxylate and dicarboxylate metabolism
xcf00730  Thiamine metabolism
xcf00740  Riboflavin metabolism
xcf00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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