KEGG Orthology (KO) - Candidatus Desulfovibrio trichonymphae

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:dtr03000]
     03021 Transcription machinery [BR:dtr03021]
     03019 Messenger RNA biogenesis [BR:dtr03019]
     03041 Spliceosome
     03011 Ribosome [BR:dtr03011]
     03009 Ribosome biogenesis [BR:dtr03009]
     03016 Transfer RNA biogenesis [BR:dtr03016]
       RSDT_0619 tRNA nucleotidyltransferase/poly(A) polymerase
       RSDT_1033 gltX; glutamyl-tRNA synthetase
       RSDT_0516 proS; prolyl-tRNA synthetase
       RSDT_1005 ileS; isoleucyl-tRNA synthetase
       RSDT_0835 leuS; leucyl-tRNA synthetase
       RSDT_0494 metG; methionyl-tRNA synthetase
       RSDT_0103 glnS; glutaminyl-tRNA synthetase
       RSDT_0202 argS; arginyl-tRNA synthetase
       RSDT_0085 lysS; lysyl-tRNA synthetase
       RSDT_0974 aspS; aspartyl-tRNA synthase
       RSDT_0968 alaS; alanyl-tRNA synthetase
       RSDT_1036 asnC; asparaginyl-tRNA synthetase
       RSDT_0775 thrS; threonyl-tRNA synthetase
       RSDT_0555 serS; seryl-tRNA synthase
       RSDT_0311 Zn-dependent M48 family peptidase
       RSDT_0163 valS; valyl-tRNA synthetase
       RSDT_0975 hisS; histidyl-tRNA synthetase
       RSDT_0771 pheS; phenylalanyl-tRNA synthetase subunit alpha
       RSDT_0769 pheT; phenylalanyl-tRNA synthetase subunit beta
       RSDT_0127 tyrS; tyrosyl-tRNA synthetase
       RSDT_0067 trpS; tryptophanyl-tRNA synthetase
       RSDT_0810 trmI; tRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase
       RSDT_0492 truA; tRNA pseudouridine synthase A
       RSDT_0033 truB; tRNA pseudouridine synthase B
       RSDT_0487 nifS; cysteine desulfurase NifS
       RSDT_0199 tsaC; tRNA threonylcarbamoyladenosine biosynthesis protein tsaC
       RSDT_0934 miaA; tRNA dimethylallyltransferase
       RSDT_0174 trmE; tRNA modification GTPase TrmE
       RSDT_0419 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification protein
       RSDT_0921 selD; selenophosphate synthase
       RSDT_0178 rnpA; ribonuclease P protein component
       RSDT_RNA_1 rnpB; ribonuclease P RNA component
       RSDT_0712 rnb; putative exoribonuclease II
       RSDT_0608 uncharacterized ABC transporter ATP-binding protein
       RSDT_0385 glyQ; glycyl-tRNA synthetase subunit alpha
       RSDT_0384 glyS; glycyl-tRNA synthetase subunit beta
       RSDT_0938 tadA; tRNA(adenine34) deaminase
       RSDT_0605 dusB; tRNA-dihydrouridine synthase
       RSDT_0475 miaB; tRNA-i(6)A37 methylthiotransferase MiaB
       RSDT_0890 mtaB; putative threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
       RSDT_0439 trmFO; methylenetetrahydrofolate-tRNA-(uracil54-C5)-methyltransferase
       RSDT_0878 trmD; putative tRNA (guanine37-N1)-methyltransferase
       RSDT_1046 trmH; tRNA (guanosine-2'-O-)-methyltransferase
       RSDT_0158 trmL; tRNA (cytidine34-2'-O)-methyltransferase
       RSDT_0257 mnmA; tRNA-specific 2-thiouridylase MnmA
       RSDT_0390 conserved hypothetical protein
       RSDT_0859 queA; S-adenosylmethionine-tRNA ribosyltransferase-isomerase
       RSDT_0560 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase
       RSDT_0146 queF; preQ1 synthase
       RSDT_0716 conserved hypothetical protein
       RSDT_1063 tgt; queuine tRNA-ribosyltransferase
       RSDT_0395 tilS; tRNA(Ile)-lysidine synthetase
       RSDT_1074 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
       RSDT_0326 tsaD; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD
       RSDT_0747 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
       RSDT_0035 pnp; polyribonucleotide nucleotidyltransferase
K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K01978 rnpB; M1 RNA
K01147 rnb; exoribonuclease II [EC:3.1.13.1]
K06020 ettA; energy-dependent translational throttle protein EttA
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K13628 iscA; iron-sulfur cluster assembly protein
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
     03012 Translation factors [BR:dtr03012]
     03110 Chaperones and folding catalysts [BR:dtr03110]
     04131 Membrane trafficking [BR:dtr04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:dtr03051]
     03032 DNA replication proteins [BR:dtr03032]
     03036 Chromosome and associated proteins [BR:dtr03036]
     03400 DNA repair and recombination proteins [BR:dtr03400]
     03029 Mitochondrial biogenesis [BR:dtr03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 25, 2024